Difference between revisions of "TSS:Hg 234970.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000652315.1:25 AF527605:25 BC146814:31 ENST00000479769.1:38 BC171753:45 BC136274:45 ENST00000427887.2:-194 NM_015296:-263 NM_001318849:-263 NM_001130049:-263 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=25 |
| − | |distance_to_tss= | + | |distance_to_tss=1701 |
|end=77742920 | |end=77742920 | ||
|end_of_center_position=99086431 | |end_of_center_position=99086431 | ||
| Line 11: | Line 11: | ||
|gene_alias=C13orf32 | |gene_alias=C13orf32 | ||
|gene_description=SLAIN motif family member 1 | |gene_description=SLAIN motif family member 1 | ||
| − | |gene_id= | + | |gene_id=23348 |
| − | |gene_name= | + | |gene_name=dedicator of cytokinesis 9 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:14132 |
| − | |gene_symbol= | + | |gene_symbol=DOCK9 |
| − | |gene_synonyms= | + | |gene_synonyms=KIAA1058 ZIZ1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:14132 |
|nearest_ensembl=ENSG00000139737 | |nearest_ensembl=ENSG00000139737 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001242870 |
|nearest_refseq=NM_144595 | |nearest_refseq=NM_144595 | ||
|nearest_unigene=Hs.349955 | |nearest_unigene=Hs.349955 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=77742919 | |start=77742919 | ||
|start_of_center_position=99086430 | |start_of_center_position=99086430 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000652315.1 AF527605 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_234970.1 | |tss_id=hg_234970.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9BZ29 |
}} | }} | ||
Revision as of 13:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 99086430 |
|---|---|
| End of the center position in the TSS region: | 99086431 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000652315.1 AF527605 |
|---|---|
| Distance: | 25 |
| Num_trans: | 10 |
| All_trans: | ENST00000652315.1:25 AF527605:25 BC146814:31 ENST00000479769.1:38 BC171753:45 BC136274:45 ENST00000427887.2:-194 NM_015296:-263 NM_001318849:-263 NM_001130049:-263 |
TATA-Box annotation
| Distance to TSS: | 1701 |
|---|---|
| Nearest PromoterID: | NM_001242870 |
| Entrez ID: | 122060 |
| Nearest Unigene: | Hs.349955 |
| Nearest Refseq: | NM_144595 |
| Nearest Ensembl: | ENSG00000139737 |
| Gene Name: | dedicator of cytokinesis 9 |
| Gene Alias: | C13orf32 |
| Gene Description: | SLAIN motif family member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
