Difference between revisions of "TSS:Hg 235068.1"
From referenceTSS
| Line 12: | Line 12: | ||
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-75 | |distance_to_tss=-75 | ||
|end=105247960 | |end=105247960 | ||
| Line 18: | Line 18: | ||
|entrez_id=2972 | |entrez_id=2972 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=BRF | + | |gene_alias=BRF{{!}}BRF-1{{!}}CFDS{{!}}GTF3B{{!}}HEL-S-76p{{!}}TAF3B2{{!}}TAF3C{{!}}TAFIII90{{!}}TF3B90{{!}}TFIIIB90{{!}}hBRF |
| − | |gene_description= | + | |gene_description=BRF1 RNA polymerase III transcription initiation factor subunit |
|gene_id=2972 | |gene_id=2972 | ||
| − | |gene_name= | + | |gene_name=BRF1 |
|gene_source=HGNC:1107 HGNC:11551 | |gene_source=HGNC:1107 HGNC:11551 | ||
|gene_symbol=BRF1 ZFP36L1 | |gene_symbol=BRF1 ZFP36L1 | ||
| Line 32: | Line 32: | ||
|nearest_refseq=NM_001519 | |nearest_refseq=NM_001519 | ||
|nearest_unigene=Hs.424484 | |nearest_unigene=Hs.424484 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=105247959 | |start=105247959 | ||
|start_of_center_position=23000190 | |start_of_center_position=23000190 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_235068.1 | |tss_id=hg_235068.1 | ||
Revision as of 13:25, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23000190 |
|---|---|
| End of the center position in the TSS region: | 23000191 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000392557.8:66 uc001yql.3:66 NM_145685:75 AJ297407:75 AJ297406:-471 |
TATA-Box annotation
| Distance to TSS: | -75 |
|---|---|
| Nearest PromoterID: | NM_145685 |
| Entrez ID: | 2972 |
| Nearest Unigene: | Hs.424484 |
| Nearest Refseq: | NM_001519 |
| Nearest Ensembl: | ENSG00000185024 |
| Gene Name: | BRF1 |
| Gene Alias: | BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF |
| Gene Description: | BRF1 RNA polymerase III transcription initiation factor subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
