Difference between revisions of "TSS:Hg 235155.1"
From referenceTSS
| Line 5: | Line 5: | ||
|SPMD= | |SPMD= | ||
|SPMM= | |SPMM= | ||
| + | |all_trans=ENST00000363299.1:0 NR_002755:0 | ||
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=2969 |
|end=23432695 | |end=23432695 | ||
|end_of_center_position=44731171 | |end_of_center_position=44731171 | ||
|entrez_id=4625 | |entrez_id=4625 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=CMD1S | + | |gene_alias=CMD1S{{!}}CMH1{{!}}MPD1{{!}}MYHCB{{!}}SPMD{{!}}SPMM |
|gene_description=myosin heavy chain 7 | |gene_description=myosin heavy chain 7 | ||
| − | |gene_name= | + | |gene_id=26830 |
| + | |gene_name=RNA, U5D small nuclear 1 | ||
| + | |gene_source=HGNC:10214 | ||
| + | |gene_symbol=RNU5D-1 | ||
| + | |gene_synonyms=U5DL U5DS | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10214 | ||
|nearest_ensembl=ENSG00000092054 | |nearest_ensembl=ENSG00000092054 | ||
|nearest_promoter_id=NM_000257 | |nearest_promoter_id=NM_000257 | ||
|nearest_refseq=NM_000257 | |nearest_refseq=NM_000257 | ||
|nearest_unigene=Hs.719946 | |nearest_unigene=Hs.719946 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=23432687 | |start=23432687 | ||
|start_of_center_position=44731170 | |start_of_center_position=44731170 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000363299.1 NR_002755 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_235155.1 | |tss_id=hg_235155.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 13:27, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44731170 |
|---|---|
| End of the center position in the TSS region: | 44731171 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000363299.1 NR_002755 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000363299.1:0 NR_002755:0 |
TATA-Box annotation
| Distance to TSS: | 2969 |
|---|---|
| Nearest PromoterID: | NM_000257 |
| Entrez ID: | 4625 |
| Nearest Unigene: | Hs.719946 |
| Nearest Refseq: | NM_000257 |
| Nearest Ensembl: | ENSG00000092054 |
| Gene Name: | RNA, U5D small nuclear 1 |
| Gene Alias: | CMD1S|CMH1|MPD1|MYHCB|SPMD|SPMM |
| Gene Description: | myosin heavy chain 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
