Difference between revisions of "TSS:Hg 236087.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans= | + | |all_trans=BC151229:53 AB011092:53 BC151207:59 AJ133123:-105 ENST00000294016.8:-362 NM_001116:-362 BC136657:378 BC136658:378 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
− | |distance= | + | |distance=53 |
|distance_to_tss=1 | |distance_to_tss=1 | ||
|end=29454503 | |end=29454503 | ||
|end_of_center_position=4116080 | |end_of_center_position=4116080 | ||
− | |entrez_id= | + | |entrez_id=79008 |
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
− | |gene_alias= | + | |gene_alias=GIYD2 |
− | |gene_description= | + | |gene_description=SLX1 homolog B, structure-specific endonuclease subunit |
− | |gene_id= | + | |gene_id=115 |
− | |gene_name= | + | |gene_name=adenylate cyclase 9 |
− | |gene_source=HGNC: | + | |gene_source=HGNC:240 |
− | |gene_symbol= | + | |gene_symbol=ADCY9 |
− | |gene_synonyms= | + | |gene_synonyms=AC9 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
− | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:240 |
− | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000181625 |
− | |nearest_promoter_id= | + | |nearest_promoter_id=NM_024044 |
− | |nearest_refseq= | + | |nearest_refseq=NM_024044 |
− | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.728161 |
− | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=29454500 | |start=29454500 | ||
|start_of_center_position=4116079 | |start_of_center_position=4116079 | ||
|strand=+ | |strand=+ | ||
− | |transcript_name= | + | |transcript_name=BC151229 AB011092 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_236087.1 | |tss_id=hg_236087.1 | ||
|tss_score=1 | |tss_score=1 | ||
− | |uniprot_id= | + | |uniprot_id= |
}} | }} |
Revision as of 13:48, 17 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 4116079 |
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End of the center position in the TSS region: | 4116080 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | BC151229 AB011092 |
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Distance: | 53 |
Num_trans: | 8 |
All_trans: | BC151229:53 AB011092:53 BC151207:59 AJ133123:-105 ENST00000294016.8:-362 NM_001116:-362 BC136657:378 BC136658:378 |
TATA-Box annotation
Distance to TSS: | 1 |
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Nearest PromoterID: | NM_024044 |
Entrez ID: | 79008 |
Nearest Unigene: | Hs.728161 |
Nearest Refseq: | NM_024044 |
Nearest Ensembl: | ENSG00000181625 |
Gene Name: | adenylate cyclase 9 |
Gene Alias: | GIYD2 |
Gene Description: | SLX1 homolog B, structure-specific endonuclease subunit |
Gene Type: | protein-coding |
CpG%: | 0.095 |
GC%: | 0.651741 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |