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Difference between revisions of "TSS:Hg 236087.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000330181.9:0 NM_024044:0 NM_178044:0 NM_001014999:0 NM_001015000:0 uc002dsx.4:0 ENST00000565219.1:42 uc059sst.1:42 ENST00000351581.4:59 uc002dsy.4:59
+
|all_trans=BC151229:53 AB011092:53 BC151207:59 AJ133123:-105 ENST00000294016.8:-362 NM_001116:-362 BC136657:378 BC136658:378
 
|chr=chr16
 
|chr=chr16
 
|cpg_percent=0.095
 
|cpg_percent=0.095
|distance=0
+
|distance=53
 
|distance_to_tss=1
 
|distance_to_tss=1
 
|end=29454503
 
|end=29454503
 
|end_of_center_position=4116080
 
|end_of_center_position=4116080
|entrez_id=548593
+
|entrez_id=79008
 
|gc_percent=0.651741
 
|gc_percent=0.651741
|gene_alias=GIYD1
+
|gene_alias=GIYD2
|gene_description="SLX1 homolog A, structure-specific endonuclease subunit"
+
|gene_description=SLX1 homolog B, structure-specific endonuclease subunit
|gene_id=105369236 548593 79008
+
|gene_id=115
|gene_name="SLX1 homolog A, structure-specific endonuclease subunit; SLX1 homolog B, structure-specific endonuclease subunit"
+
|gene_name=adenylate cyclase 9
|gene_source=HGNC:20922 HGNC:28748
+
|gene_source=HGNC:240
|gene_symbol=SLX1A SLX1B
+
|gene_symbol=ADCY9
|gene_synonyms=MGC5178
+
|gene_synonyms=AC9
 
|gene_type=protein-coding
 
|gene_type=protein-coding
|hgnc_mgi_id=HGNC:20922 HGNC:28748
+
|hgnc_mgi_id=HGNC:240
|nearest_ensembl=ENSG00000132207
+
|nearest_ensembl=ENSG00000181625
|nearest_promoter_id=NM_001014999
+
|nearest_promoter_id=NM_024044
|nearest_refseq=NM_001014999
+
|nearest_refseq=NM_024044
|nearest_unigene=Hs.729791
+
|nearest_unigene=Hs.728161
|num_trans=10
+
|num_trans=8
 
|species=human
 
|species=human
 
|start=29454500
 
|start=29454500
 
|start_of_center_position=4116079
 
|start_of_center_position=4116079
 
|strand=+
 
|strand=+
|transcript_name=ENST00000330181.9 NM_024044 NM_178044 NM_001014999 NM_001015000 uc002dsx.4
+
|transcript_name=BC151229 AB011092
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_236087.1
 
|tss_id=hg_236087.1
 
|tss_score=1
 
|tss_score=1
|uniprot_id=Q9BQ83
+
|uniprot_id=
 
}}
 
}}

Revision as of 13:48, 17 June 2021

Basic information about the TSS


TSS ID:hg_236087.1
Species:human
Chr:chr16
TSS Classification:yes
Start:29454500
End:29454503
Strand:+
TSS Score:1
Start of the center position in the TSS region:4116079
End of the center position in the TSS region:4116080



Gene and protein annotation


Transcript_name:BC151229 AB011092
Distance:53
GeneID:115
HGNC/MGI_ID:HGNC:240
UniProt_ID:
Gene_name:adenylate cyclase 9
Gene_symbol:ADCY9
Gene_synonyms:AC9
Gene_source:HGNC:240



Transcript annotation


Transcript_name:BC151229 AB011092
Distance:53
Num_trans:8
All_trans:BC151229:53 AB011092:53 BC151207:59 AJ133123:-105 ENST00000294016.8:-362 NM_001116:-362 BC136657:378 BC136658:378



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_024044
Entrez ID:79008
Nearest Unigene:Hs.728161
Nearest Refseq:NM_024044
Nearest Ensembl:ENSG00000181625
Gene Name:adenylate cyclase 9
Gene Alias:GIYD2
Gene Description:SLX1 homolog B, structure-specific endonuclease subunit
Gene Type:protein-coding
CpG%:0.095
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):