Difference between revisions of "TSS:Hg 23794.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000394967. | + | |all_trans=ENST00000394967.3:-16 NM_001145250:-16 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance=- | + | |distance=-16 |
| − | |distance_to_tss= | + | |distance_to_tss=20 |
|end=174334978 | |end=174334978 | ||
|end_of_center_position=174334974 | |end_of_center_position=174334974 | ||
| Line 21: | Line 21: | ||
|nearest_promoter_id=NM_001145250 | |nearest_promoter_id=NM_001145250 | ||
|nearest_refseq=NM_001145250 | |nearest_refseq=NM_001145250 | ||
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=174334969 | |start=174334969 | ||
|start_of_center_position=174334973 | |start_of_center_position=174334973 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000394967. | + | |transcript_name=ENST00000394967.3 NM_001145250 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_23794.1 | |tss_id=hg_23794.1 | ||
Revision as of 14:31, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 174334973 |
|---|---|
| End of the center position in the TSS region: | 174334974 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000394967.3 NM_001145250 |
|---|---|
| Distance: | -16 |
| Num_trans: | 2 |
| All_trans: | ENST00000394967.3:-16 NM_001145250:-16 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001145250 |
| Entrez ID: | 100131390 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001145250 |
| Nearest Ensembl: | ENSG00000217236 |
| Gene Name: | Sp9 transcription factor |
| Gene Alias: | ZNF990 |
| Gene Description: | Sp9 transcription factor |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
