Difference between revisions of "TSS:Hg 238113.1"
From referenceTSS
| Line 2: | Line 2: | ||
|HH0048= | |HH0048= | ||
|KLP-11= | |KLP-11= | ||
| + | |all_trans=ENST00000614771.2:212 ENST00000613231.1:239 NR_131157:239 AK056098:239 | ||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=212 |
|distance_to_tss=32994 | |distance_to_tss=32994 | ||
|end=32310648 | |end=32310648 | ||
| Line 10: | Line 11: | ||
|entrez_id=9371 | |entrez_id=9371 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=FLA8 | + | |gene_alias=FLA8{{!}}HH0048{{!}}KLP-11 |
|gene_description=kinesin family member 3B | |gene_description=kinesin family member 3B | ||
| − | |gene_name= | + | |gene_id=105416157 |
| + | |gene_name=NF-kappaB interacting lncRNA | ||
| + | |gene_source=HGNC:51599 | ||
| + | |gene_symbol=NKILA | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:51599 | ||
|nearest_ensembl=ENSG00000101350 | |nearest_ensembl=ENSG00000101350 | ||
|nearest_promoter_id=NM_004798 | |nearest_promoter_id=NM_004798 | ||
|nearest_refseq=NM_004798 | |nearest_refseq=NM_004798 | ||
|nearest_unigene=Hs.369670 | |nearest_unigene=Hs.369670 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=32310642 | |start=32310642 | ||
|start_of_center_position=57709935 | |start_of_center_position=57709935 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000614771.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_238113.1 | |tss_id=hg_238113.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 14:35, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 57709935 |
|---|---|
| End of the center position in the TSS region: | 57709936 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000614771.2 |
|---|---|
| Distance: | 212 |
| Num_trans: | 4 |
| All_trans: | ENST00000614771.2:212 ENST00000613231.1:239 NR_131157:239 AK056098:239 |
TATA-Box annotation
| Distance to TSS: | 32994 |
|---|---|
| Nearest PromoterID: | NM_004798 |
| Entrez ID: | 9371 |
| Nearest Unigene: | Hs.369670 |
| Nearest Refseq: | NM_004798 |
| Nearest Ensembl: | ENSG00000101350 |
| Gene Name: | NF-kappaB interacting lncRNA |
| Gene Alias: | FLA8|HH0048|KLP-11 |
| Gene Description: | kinesin family member 3B |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
