Difference between revisions of "TSS:Hg 238586.1"
From referenceTSS
| Line 5: | Line 5: | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=70221 | |distance_to_tss=70221 | ||
|end=1484629 | |end=1484629 | ||
| Line 11: | Line 11: | ||
|entrez_id=7173 | |entrez_id=7173 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=MSA | + | |gene_alias=MSA{{!}}TDH2A{{!}}TPX |
|gene_description=thyroid peroxidase | |gene_description=thyroid peroxidase | ||
|gene_id=7173 | |gene_id=7173 | ||
| − | |gene_name= | + | |gene_name=TPO |
|gene_source=HGNC:12015 | |gene_source=HGNC:12015 | ||
|gene_symbol=TPO | |gene_symbol=TPO | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:12015 | |hgnc_mgi_id=HGNC:12015 | ||
|nearest_ensembl=ENSG00000115705 | |nearest_ensembl=ENSG00000115705 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_175722 |
|nearest_refseq=NM_000547 | |nearest_refseq=NM_000547 | ||
|nearest_unigene=Hs.467554 | |nearest_unigene=Hs.467554 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=1484628 | |start=1484628 | ||
|start_of_center_position=8210138 | |start_of_center_position=8210138 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_238586.1 | |tss_id=hg_238586.1 | ||
Revision as of 14:46, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8210138 |
|---|---|
| End of the center position in the TSS region: | 8210139 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000446278.5:34 uc061gbr.1:34 AF533530:34 ENST00000469607.3:36 uc061gbs.1:36 AF533531:36 ENST00000462973.5:40 uc061gbt.1:40 AF533529:40 |
TATA-Box annotation
| Distance to TSS: | 70221 |
|---|---|
| Nearest PromoterID: | NM_175722 |
| Entrez ID: | 7173 |
| Nearest Unigene: | Hs.467554 |
| Nearest Refseq: | NM_000547 |
| Nearest Ensembl: | ENSG00000115705 |
| Gene Name: | TPO |
| Gene Alias: | MSA|TDH2A|TPX |
| Gene Description: | thyroid peroxidase |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
