Difference between revisions of "TSS:Hg 241882.1"
From referenceTSS
| Line 2: | Line 2: | ||
|TTMA= | |TTMA= | ||
|TTMC= | |TTMC= | ||
| − | |all_trans= | + | |all_trans=ENST00000542713.1:26 NM_001145777:26 AF194172:31 U71321:31 ENST00000539068.5:53 ENST00000357266.9:53 NM_001145776:53 NM_004117:53 BX647390:53 AK302704:53 AK303356:53 AK222807:53 AK312422:53 BC111050:65 AB209893:114 HM245391:117 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=26 |
|distance_to_tss=83 | |distance_to_tss=83 | ||
|end=130437200 | |end=130437200 | ||
| Line 11: | Line 11: | ||
|entrez_id=114801 | |entrez_id=114801 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=KIAA1913 | + | |gene_alias=KIAA1913{{!}}TTMA{{!}}TTMC |
|gene_description=transmembrane protein 200A | |gene_description=transmembrane protein 200A | ||
| − | |gene_id= | + | |gene_id=2289 |
| − | |gene_name= | + | |gene_name=FKBP prolyl isomerase 5 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:3721 |
| − | |gene_symbol= | + | |gene_symbol=FKBP5 |
| − | |gene_synonyms= | + | |gene_synonyms=FKBP51 FKBP54 P54 PPIase Ptg-10 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:3721 |
|nearest_ensembl=ENSG00000164484 | |nearest_ensembl=ENSG00000164484 | ||
|nearest_promoter_id=NM_052913 | |nearest_promoter_id=NM_052913 | ||
|nearest_refseq=NM_052913 | |nearest_refseq=NM_052913 | ||
|nearest_unigene=Hs.591341 | |nearest_unigene=Hs.591341 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=130437199 | |start=130437199 | ||
|start_of_center_position=35688969 | |start_of_center_position=35688969 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000542713.1 NM_001145777 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_241882.1 | |tss_id=hg_241882.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q13451 |
}} | }} | ||
Revision as of 16:02, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35688969 |
|---|---|
| End of the center position in the TSS region: | 35688970 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000542713.1 NM_001145777 |
|---|---|
| Distance: | 26 |
| Num_trans: | 16 |
| All_trans: | ENST00000542713.1:26 NM_001145777:26 AF194172:31 U71321:31 ENST00000539068.5:53 ENST00000357266.9:53 NM_001145776:53 NM_004117:53 BX647390:53 AK302704:53 AK303356:53 AK222807:53 AK312422:53 BC111050:65 AB209893:114 HM245391:117 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_052913 |
| Entrez ID: | 114801 |
| Nearest Unigene: | Hs.591341 |
| Nearest Refseq: | NM_052913 |
| Nearest Ensembl: | ENSG00000164484 |
| Gene Name: | FKBP prolyl isomerase 5 |
| Gene Alias: | KIAA1913|TTMA|TTMC |
| Gene Description: | transmembrane protein 200A |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
