Difference between revisions of "TSS:Hg 242743.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000265801.6:19 AF123659:19 BC075006:81 BC075007:81 EU446940:126 ENST00000522290.5:130 ENST00000616228.1:130 AF123654:130 AF123655:130 AF123656:130 AF123657:130 AF123658:130 AF123652:130 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=19 |
| − | |distance_to_tss= | + | |distance_to_tss=10404 |
|end=56074692 | |end=56074692 | ||
|end_of_center_position=20255311 | |end_of_center_position=20255311 | ||
| Line 10: | Line 11: | ||
|gene_alias=pFGE | |gene_alias=pFGE | ||
|gene_description=sulfatase modifying factor 2 | |gene_description=sulfatase modifying factor 2 | ||
| − | |gene_name= | + | |gene_id=11178 |
| + | |gene_name=leucine zipper tumor suppressor 1 | ||
| + | |gene_source=HGNC:13861 | ||
| + | |gene_symbol=LZTS1 | ||
| + | |gene_synonyms=FEZ1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13861 | ||
|nearest_ensembl=ENSG00000129103 | |nearest_ensembl=ENSG00000129103 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001042468 |
|nearest_refseq=NM_015411 | |nearest_refseq=NM_015411 | ||
|nearest_unigene=Hs.279696 | |nearest_unigene=Hs.279696 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=56074687 | |start=56074687 | ||
|start_of_center_position=20255310 | |start_of_center_position=20255310 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000265801.6 AF123659 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_242743.1 | |tss_id=hg_242743.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q9Y250 | ||
}} | }} | ||
Revision as of 16:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20255310 |
|---|---|
| End of the center position in the TSS region: | 20255311 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000265801.6 AF123659 |
|---|---|
| Distance: | 19 |
| Num_trans: | 13 |
| All_trans: | ENST00000265801.6:19 AF123659:19 BC075006:81 BC075007:81 EU446940:126 ENST00000522290.5:130 ENST00000616228.1:130 AF123654:130 AF123655:130 AF123656:130 AF123657:130 AF123658:130 AF123652:130 |
TATA-Box annotation
| Distance to TSS: | 10404 |
|---|---|
| Nearest PromoterID: | NM_001042468 |
| Entrez ID: | 25870 |
| Nearest Unigene: | Hs.279696 |
| Nearest Refseq: | NM_015411 |
| Nearest Ensembl: | ENSG00000129103 |
| Gene Name: | leucine zipper tumor suppressor 1 |
| Gene Alias: | pFGE |
| Gene Description: | sulfatase modifying factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
