Difference between revisions of "TSS:Hg 243192.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AK127340:-133 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| − | |distance=- | + | |distance=-133 |
|distance_to_tss=64 | |distance_to_tss=64 | ||
|end=52939972 | |end=52939972 | ||
| Line 11: | Line 11: | ||
|gene_alias=GPR7 | |gene_alias=GPR7 | ||
|gene_description=neuropeptides B and W receptor 1 | |gene_description=neuropeptides B and W receptor 1 | ||
| − | |gene_id= | + | |gene_id=375775 |
| − | |gene_name= | + | |gene_name=patatin like phospholipase domain containing 7 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:24768 |
| − | |gene_symbol= | + | |gene_symbol=PNPLA7 |
| − | |gene_synonyms= | + | |gene_synonyms=FLJ31318 FLJ43070 FLJ44279 NTE-R1 NTEL1 RP11-48C7.2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:24768 |
|nearest_ensembl=ENSG00000183729 | |nearest_ensembl=ENSG00000183729 | ||
|nearest_promoter_id=NM_005285 | |nearest_promoter_id=NM_005285 | ||
|nearest_refseq=NM_005285 | |nearest_refseq=NM_005285 | ||
|nearest_unigene=Hs.248117 | |nearest_unigene=Hs.248117 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=52939971 | |start=52939971 | ||
|start_of_center_position=137487494 | |start_of_center_position=137487494 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK127340 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_243192.1 | |tss_id=hg_243192.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B3KXH5 |
}} | }} | ||
Revision as of 16:33, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137487494 |
|---|---|
| End of the center position in the TSS region: | 137487495 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK127340 |
|---|---|
| Distance: | -133 |
| Num_trans: | 1 |
| All_trans: | AK127340:-133 |
TATA-Box annotation
| Distance to TSS: | 64 |
|---|---|
| Nearest PromoterID: | NM_005285 |
| Entrez ID: | 2831 |
| Nearest Unigene: | Hs.248117 |
| Nearest Refseq: | NM_005285 |
| Nearest Ensembl: | ENSG00000183729 |
| Gene Name: | patatin like phospholipase domain containing 7 |
| Gene Alias: | GPR7 |
| Gene Description: | neuropeptides B and W receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
