Difference between revisions of "TSS:Hg 243572.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK026547:-263 DQ600534:-443 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-263 |
| − | |distance_to_tss= | + | |distance_to_tss=3277 |
|end=27002401 | |end=27002401 | ||
|end_of_center_position=6681 | |end_of_center_position=6681 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=leucine rich repeat containing 19 | |gene_description=leucine rich repeat containing 19 | ||
| − | |gene_name= | + | |gene_id=107075141 |
| + | |gene_name=MT-CO1 pseudogene 12 | ||
| + | |gene_source=HGNC:52014 | ||
| + | |gene_symbol=MTCO1P12 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:52014 | ||
|nearest_ensembl=ENSG00000184434 | |nearest_ensembl=ENSG00000184434 | ||
|nearest_promoter_id=NM_022901 | |nearest_promoter_id=NM_022901 | ||
|nearest_refseq=NM_022901 | |nearest_refseq=NM_022901 | ||
|nearest_unigene=Hs.128071 | |nearest_unigene=Hs.128071 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=27002388 | |start=27002388 | ||
|start_of_center_position=6680 | |start_of_center_position=6680 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK026547 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243572.1 | |tss_id=hg_243572.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:41, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6680 |
|---|---|
| End of the center position in the TSS region: | 6681 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK026547 |
|---|---|
| Distance: | -263 |
| Num_trans: | 2 |
| All_trans: | AK026547:-263 DQ600534:-443 |
TATA-Box annotation
| Distance to TSS: | 3277 |
|---|---|
| Nearest PromoterID: | NM_022901 |
| Entrez ID: | 64922 |
| Nearest Unigene: | Hs.128071 |
| Nearest Refseq: | NM_022901 |
| Nearest Ensembl: | ENSG00000184434 |
| Gene Name: | MT-CO1 pseudogene 12 |
| Gene Alias: | - |
| Gene Description: | leucine rich repeat containing 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
