Difference between revisions of "TSS:Hg 3211.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000608956 | + | |all_trans=ENST00000608956.1:328 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=328 | |distance=328 | ||
| − | |distance_to_tss= | + | |distance_to_tss=16909 |
|end=64220536 | |end=64220536 | ||
|end_of_center_position=64220533 | |end_of_center_position=64220533 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=ubiquitin conjugating enzyme E2 U | + | |gene_description=ubiquitin conjugating enzyme E2 U |
|gene_id=148581 | |gene_id=148581 | ||
| − | |gene_name=ubiquitin conjugating enzyme E2 U | + | |gene_name=ubiquitin conjugating enzyme E2 U |
|gene_source=HGNC:28559 | |gene_source=HGNC:28559 | ||
|gene_symbol=UBE2U | |gene_symbol=UBE2U | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_152489 | |nearest_refseq=NM_152489 | ||
|nearest_unigene=Hs.388746 | |nearest_unigene=Hs.388746 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=64220528 | |start=64220528 | ||
|start_of_center_position=64220532 | |start_of_center_position=64220532 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000608956 | + | |transcript_name=ENST00000608956.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_3211.1 | |tss_id=hg_3211.1 | ||
Revision as of 19:58, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 64220532 |
|---|---|
| End of the center position in the TSS region: | 64220533 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000608956.1 |
|---|---|
| Distance: | 328 |
| Num_trans: | 1 |
| All_trans: | ENST00000608956.1:328 |
TATA-Box annotation
| Distance to TSS: | 16909 |
|---|---|
| Nearest PromoterID: | NM_152489 |
| Entrez ID: | 148581 |
| Nearest Unigene: | Hs.388746 |
| Nearest Refseq: | NM_152489 |
| Nearest Ensembl: | ENSG00000177414 |
| Gene Name: | ubiquitin conjugating enzyme E2 U |
| Gene Alias: | - |
| Gene Description: | ubiquitin conjugating enzyme E2 U |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
