Difference between revisions of "TSS:Hg 38003.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000651682.1:0 ENST00000657808.1:0 ENST00000475939.5:0 AK098660:0 ENST00000496219.5:-5 NR_038993:-5 ENST00000657013.1:-7 ENST00000467304.2:-11 ENST00000659927.1:-11 ENST00000654216.1:-20 ENST00000659395.1:-45 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038993 | |nearest_refseq=NR_038993 | ||
|nearest_unigene=Hs.122417 | |nearest_unigene=Hs.122417 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=114351815 | |start=114351815 | ||
|start_of_center_position=114351825 | |start_of_center_position=114351825 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000475939.5 | + | |transcript_name=ENST00000651682.1 ENST00000657808.1 ENST00000475939.5 AK098660 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_38003.1 | |tss_id=hg_38003.1 | ||
Revision as of 22:14, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 114351825 |
|---|---|
| End of the center position in the TSS region: | 114351826 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000651682.1 ENST00000657808.1 ENST00000475939.5 AK098660 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000651682.1:0 ENST00000657808.1:0 ENST00000475939.5:0 AK098660:0 ENST00000496219.5:-5 NR_038993:-5 ENST00000657013.1:-7 ENST00000467304.2:-11 ENST00000659927.1:-11 ENST00000654216.1:-20 ENST00000659395.1:-45 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NR_038993 |
| Entrez ID: | 100131117 |
| Nearest Unigene: | Hs.122417 |
| Nearest Refseq: | NR_038993 |
| Nearest Ensembl: | ENSG00000241560 |
| Gene Name: | ZBTB20 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | ZBTB20 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
