Difference between revisions of "TSS:Hg 4814.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK296384:-82 ENST00000418797.5 | + | |all_trans=AK296384:-82 ENST00000418797.5:190 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-82 | |distance=-82 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-773 |
|end=116372478 | |end=116372478 | ||
|end_of_center_position=116372471 | |end_of_center_position=116372471 | ||
|entrez_id=476 | |entrez_id=476 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias= | + | |gene_alias=CMT2DD{{!}}HOMGSMR2 |
|gene_description=ATPase Na+/K+ transporting subunit alpha 1 | |gene_description=ATPase Na+/K+ transporting subunit alpha 1 | ||
|gene_id=476 | |gene_id=476 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000701 | |nearest_refseq=NM_000701 | ||
|nearest_unigene=Hs.371889 | |nearest_unigene=Hs.371889 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=116372463 | |start=116372463 | ||
|start_of_center_position=116372470 | |start_of_center_position=116372470 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-37(TTCCCTAAAAAG,-,0.00),-35(CCCTAAAAAGAG,+,0.00) |
|transcript_name=AK296384 | |transcript_name=AK296384 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 02:08, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116372470 |
|---|---|
| End of the center position in the TSS region: | 116372471 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK296384 |
|---|---|
| Distance: | -82 |
| Num_trans: | 2 |
| All_trans: | AK296384:-82 ENST00000418797.5:190 |
TATA-Box annotation
| Distance to TSS: | -773 |
|---|---|
| Nearest PromoterID: | NM_000701 |
| Entrez ID: | 476 |
| Nearest Unigene: | Hs.371889 |
| Nearest Refseq: | NM_000701 |
| Nearest Ensembl: | ENSG00000163399 |
| Gene Name: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Alias: | CMT2DD|HOMGSMR2 |
| Gene Description: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -37(TTCCCTAAAAAG,-,0.00),-35(CCCTAAAAAGAG,+,0.00) |
