Difference between revisions of "TSS:Hg 51006.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000503571.5:0 ENST00000503185.5:0 ENST00000503405.1:0 NR_036511:0 NR_036512 | + | |all_trans=ENST00000660016.1:0 ENST00000665579.1:0 ENST00000503571.5:0 ENST00000652800.1:0 ENST00000503185.5:0 ENST00000503405.1:0 NR_036511:0 NR_036512:0 BC040652:0 AK055583:0 ENST00000507446.1:1 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000249592 | |nearest_ensembl=ENSG00000249592 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_036512 |
|nearest_refseq=NR_036511 | |nearest_refseq=NR_036511 | ||
|nearest_unigene=Hs.731755 | |nearest_unigene=Hs.731755 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=781830 | |start=781830 | ||
|start_of_center_position=781847 | |start_of_center_position=781847 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000503571.5 ENST00000503185.5 ENST00000503405.1 NR_036511 NR_036512 | + | |transcript_name=ENST00000660016.1 ENST00000665579.1 ENST00000503571.5 ENST00000652800.1 ENST00000503185.5 ENST00000503405.1 NR_036511 NR_036512 BC040652 AK055583 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_51006.1 | |tss_id=hg_51006.1 | ||
Revision as of 03:15, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 781847 |
|---|---|
| End of the center position in the TSS region: | 781848 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000660016.1 ENST00000665579.1 ENST00000503571.5 ENST00000652800.1 ENST00000503185.5 ENST00000503405.1 NR_036511 NR_036512 BC040652 AK055583 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000660016.1:0 ENST00000665579.1:0 ENST00000503571.5:0 ENST00000652800.1:0 ENST00000503185.5:0 ENST00000503405.1:0 NR_036511:0 NR_036512:0 BC040652:0 AK055583:0 ENST00000507446.1:1 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NR_036512 |
| Entrez ID: | 100129917 |
| Nearest Unigene: | Hs.731755 |
| Nearest Refseq: | NR_036511 |
| Nearest Ensembl: | ENSG00000249592 |
| Gene Name: | uncharacterized LOC100129917 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100129917 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
