Difference between revisions of "TSS:Hg 52008.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK289662:0 ENST00000510233.5:311 ENST00000507069.5:311 ENST00000513005.5:311 ENST00000509716.2 | + | |all_trans=NM_001377151:0 AK289662:0 ENST00000510233.5:311 ENST00000507069.5:311 ENST00000513005.5:311 ENST00000509716.2:311 AB384913:318 JF432507:318 KJ901438:318 KU178081:318 KU178082:318 KU178083:318 KU178084:318 KU178085:318 ENST00000503806.5:-321 ENST00000356504.5:-337 AK125179:-337 ENST00000514090.5:-339 ENST00000506961.5:-340 NM_001114175:-367 NM_001330690:-367 NM_001377147:-367 NM_001377153:-367 NM_001377150:-367 NM_001377149:-367 NM_001377148:-367 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 12: | Line 12: | ||
|gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | |gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | ||
|gene_id=2555 | |gene_id=2555 | ||
| − | |gene_name=gamma-aminobutyric acid type A receptor alpha2 | + | |gene_name=gamma-aminobutyric acid type A receptor subunit alpha2 |
|gene_source=HGNC:4076 | |gene_source=HGNC:4076 | ||
|gene_symbol=GABRA2 | |gene_symbol=GABRA2 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000807 | |nearest_refseq=NM_000807 | ||
|nearest_unigene=Hs.48372 | |nearest_unigene=Hs.48372 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=46389023 | |start=46389023 | ||
|start_of_center_position=46389032 | |start_of_center_position=46389032 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK289662 | + | |transcript_name=NM_001377151 AK289662 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_52008.1 | |tss_id=hg_52008.1 | ||
Revision as of 03:38, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 46389032 |
|---|---|
| End of the center position in the TSS region: | 46389033 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001377151 AK289662 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | NM_001377151:0 AK289662:0 ENST00000510233.5:311 ENST00000507069.5:311 ENST00000513005.5:311 ENST00000509716.2:311 AB384913:318 JF432507:318 KJ901438:318 KU178081:318 KU178082:318 KU178083:318 KU178084:318 KU178085:318 ENST00000503806.5:-321 ENST00000356504.5:-337 AK125179:-337 ENST00000514090.5:-339 ENST00000506961.5:-340 NM_001114175:-367 NM_001330690:-367 NM_001377147:-367 NM_001377153:-367 NM_001377150:-367 NM_001377149:-367 NM_001377148:-367 |
TATA-Box annotation
| Distance to TSS: | 346 |
|---|---|
| Nearest PromoterID: | NM_001114175 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor subunit alpha2 |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
