Difference between revisions of "TSS:Hg 52011.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000514090.5:0 ENST00000356504.5:0 ENST00000503806.5:0 ENST00000506961.5:0 NM_001114175:0 | + | |all_trans=ENST00000514090.5:0 ENST00000356504.5:0 ENST00000503806.5:0 ENST00000506961.5:0 NM_001114175:0 NM_001330690:0 NM_001377147:0 NM_001377153:0 NM_001377150:0 NM_001377149:0 NM_001377148:0 AK125179:0 ENST00000507460.1:-131 AK307128:-131 AK289662:314 NM_001377151:316 AB209295:-336 ENST00000630416.2:-369 ENST00000514193.5:-369 AK293466:-369 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 12: | Line 12: | ||
|gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | |gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | ||
|gene_id=2555 | |gene_id=2555 | ||
| − | |gene_name=gamma-aminobutyric acid type A receptor alpha2 | + | |gene_name=gamma-aminobutyric acid type A receptor subunit alpha2 |
|gene_source=HGNC:4076 | |gene_source=HGNC:4076 | ||
|gene_symbol=GABRA2 | |gene_symbol=GABRA2 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=46389384 | |start_of_center_position=46389384 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000514090.5 ENST00000356504.5 ENST00000503806.5 ENST00000506961.5 NM_001114175 | + | |transcript_name=ENST00000514090.5 ENST00000356504.5 ENST00000503806.5 ENST00000506961.5 NM_001114175 NM_001330690 NM_001377147 NM_001377153 NM_001377150 NM_001377149 NM_001377148 AK125179 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_52011.1 | |tss_id=hg_52011.1 | ||
Revision as of 03:39, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 46389384 |
|---|---|
| End of the center position in the TSS region: | 46389385 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000514090.5 ENST00000356504.5 ENST00000503806.5 ENST00000506961.5 NM_001114175 NM_001330690 NM_001377147 NM_001377153 NM_001377150 NM_001377149 NM_001377148 AK125179 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000514090.5:0 ENST00000356504.5:0 ENST00000503806.5:0 ENST00000506961.5:0 NM_001114175:0 NM_001330690:0 NM_001377147:0 NM_001377153:0 NM_001377150:0 NM_001377149:0 NM_001377148:0 AK125179:0 ENST00000507460.1:-131 AK307128:-131 AK289662:314 NM_001377151:316 AB209295:-336 ENST00000630416.2:-369 ENST00000514193.5:-369 AK293466:-369 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_001114175 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor subunit alpha2 |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
