Difference between revisions of "TSS:Hg 52021.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NM_001377154:-37 NM_001377146:-37 NM_001377145:-37 NM_001377155:-37 ENST00000381620.9:126 NM_000807:126 NM_001377152:126 NM_001377144:126 NM_001286827:126 ENST00000515082.5:-141 BC022488:-141 ENST00000540012.5:215 S62907:326 ENST00000630416.2:466 ENST00000514193.5:466 AK293466:466 AB209295:499 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance=- | + | |distance=-37 |
| − | |distance_to_tss=- | + | |distance_to_tss=-130 |
|end=46390263 | |end=46390263 | ||
|end_of_center_position=46390259 | |end_of_center_position=46390259 | ||
| Line 12: | Line 12: | ||
|gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | |gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | ||
|gene_id=2555 | |gene_id=2555 | ||
| − | |gene_name=gamma-aminobutyric acid type A receptor alpha2 | + | |gene_name=gamma-aminobutyric acid type A receptor subunit alpha2 |
|gene_source=HGNC:4076 | |gene_source=HGNC:4076 | ||
|gene_symbol=GABRA2 | |gene_symbol=GABRA2 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000807 | |nearest_refseq=NM_000807 | ||
|nearest_unigene=Hs.48372 | |nearest_unigene=Hs.48372 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=46390253 | |start=46390253 | ||
|start_of_center_position=46390258 | |start_of_center_position=46390258 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001377154 NM_001377146 NM_001377145 NM_001377155 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_52021.1 | |tss_id=hg_52021.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 03:39, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46390258 |
|---|---|
| End of the center position in the TSS region: | 46390259 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001377154 NM_001377146 NM_001377145 NM_001377155 |
|---|---|
| Distance: | -37 |
| Num_trans: | 17 |
| All_trans: | NM_001377154:-37 NM_001377146:-37 NM_001377145:-37 NM_001377155:-37 ENST00000381620.9:126 NM_000807:126 NM_001377152:126 NM_001377144:126 NM_001286827:126 ENST00000515082.5:-141 BC022488:-141 ENST00000540012.5:215 S62907:326 ENST00000630416.2:466 ENST00000514193.5:466 AK293466:466 AB209295:499 |
TATA-Box annotation
| Distance to TSS: | -130 |
|---|---|
| Nearest PromoterID: | NM_000807 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor subunit alpha2 |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
