Difference between revisions of "TSS:Hg 52024.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000396533.5 | + | |all_trans=ENST00000396533.5:-6 BC107855:-6 BC035923:-20 ENST00000505102.1:-34 ENST00000355591.8:-44 NM_130902:-44 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=-6 | |distance=-6 | ||
| − | |distance_to_tss= | + | |distance_to_tss=48 |
|end=46909201 | |end=46909201 | ||
|end_of_center_position=46909197 | |end_of_center_position=46909197 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_130902 | |nearest_refseq=NM_130902 | ||
|nearest_unigene=Hs.479656 | |nearest_unigene=Hs.479656 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=46909192 | |start=46909192 | ||
|start_of_center_position=46909196 | |start_of_center_position=46909196 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000396533.5 | + | |transcript_name=ENST00000396533.5 BC107855 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_52024.1 | |tss_id=hg_52024.1 | ||
Revision as of 03:39, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 46909196 |
|---|---|
| End of the center position in the TSS region: | 46909197 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000396533.5 BC107855 |
|---|---|
| Distance: | -6 |
| Num_trans: | 6 |
| All_trans: | ENST00000396533.5:-6 BC107855:-6 BC035923:-20 ENST00000505102.1:-34 ENST00000355591.8:-44 NM_130902:-44 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_130902 |
| Entrez ID: | 170712 |
| Nearest Unigene: | Hs.479656 |
| Nearest Refseq: | NM_130902 |
| Nearest Ensembl: | ENSG00000170516 |
| Gene Name: | cytochrome c oxidase subunit 7B2 |
| Gene Alias: | - |
| Gene Description: | cytochrome c oxidase subunit 7B2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
