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Difference between revisions of "TSS:Hg 52025.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000396533.5:0 uc062wix.1:0 BC107855:0 BC035923:-8 ENST00000355591.7:-18 uc003gxf.4:-18 ENST00000505102.1:-22 NM_130902:-22 uc062wiz.1:-22
+
|all_trans=ENST00000396533.5:0 BC107855:0 BC035923:-8 ENST00000505102.1:-22 ENST00000355591.8:-32 NM_130902:-32
 
|chr=chr4
 
|chr=chr4
 
|cpg_percent=0.045
 
|cpg_percent=0.045
 
|distance=0
 
|distance=0
|distance_to_tss=25
+
|distance_to_tss=35
 
|end=46909213
 
|end=46909213
 
|end_of_center_position=46909210
 
|end_of_center_position=46909210
Line 22: Line 22:
 
|nearest_refseq=NM_130902
 
|nearest_refseq=NM_130902
 
|nearest_unigene=Hs.479656
 
|nearest_unigene=Hs.479656
|num_trans=9
+
|num_trans=6
 
|species=human
 
|species=human
 
|start=46909206
 
|start=46909206
 
|start_of_center_position=46909209
 
|start_of_center_position=46909209
 
|strand=-
 
|strand=-
|transcript_name=ENST00000396533.5 uc062wix.1 BC107855
+
|transcript_name=ENST00000396533.5 BC107855
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_52025.1
 
|tss_id=hg_52025.1

Revision as of 03:39, 18 June 2021

Basic information about the TSS


TSS ID:hg_52025.1
Species:human
Chr:chr4
TSS Classification:yes
Start:46909206
End:46909213
Strand:-
TSS Score:1
Start of the center position in the TSS region:46909209
End of the center position in the TSS region:46909210



Gene and protein annotation


Transcript_name:ENST00000396533.5 BC107855
Distance:0
GeneID:170712
HGNC/MGI_ID:HGNC:24381
UniProt_ID:Q8TF08
Gene_name:cytochrome c oxidase subunit 7B2
Gene_symbol:COX7B2
Gene_synonyms:
Gene_source:HGNC:24381



Transcript annotation


Transcript_name:ENST00000396533.5 BC107855
Distance:0
Num_trans:6
All_trans:ENST00000396533.5:0 BC107855:0 BC035923:-8 ENST00000505102.1:-22 ENST00000355591.8:-32 NM_130902:-32



TATA-Box annotation


Distance to TSS:35
Nearest PromoterID:NM_130902
Entrez ID:170712
Nearest Unigene:Hs.479656
Nearest Refseq:NM_130902
Nearest Ensembl:ENSG00000170516
Gene Name:cytochrome c oxidase subunit 7B2
Gene Alias:-
Gene Description:cytochrome c oxidase subunit 7B2
Gene Type:protein-coding
CpG%:0.045
GC%:0.487562
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):