Difference between revisions of "TSS:Hg 5204.1"
From referenceTSS
| Line 4: | Line 4: | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=153 | |distance=153 | ||
| − | |distance_to_tss= | + | |distance_to_tss=22164 |
|end=151124468 | |end=151124468 | ||
|end_of_center_position=151124467 | |end_of_center_position=151124467 | ||
|entrez_id=10500 | |entrez_id=10500 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=SEMAY | + | |gene_alias=SEMAY{{!}}m-SemaY{{!}}m-SemaY2 |
|gene_description=semaphorin 6C | |gene_description=semaphorin 6C | ||
| − | |gene_name= | + | |gene_id=126626 |
| + | |gene_name=GA binding protein transcription factor subunit beta 2 | ||
| + | |gene_source=HGNC:28441 | ||
| + | |gene_symbol=GABPB2 | ||
| + | |gene_synonyms=MGC29891 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28441 | ||
|m-SemaY= | |m-SemaY= | ||
|m-SemaY2= | |m-SemaY2= | ||
|nearest_ensembl=ENSG00000143434 | |nearest_ensembl=ENSG00000143434 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_030913 |
|nearest_refseq=NM_030913 | |nearest_refseq=NM_030913 | ||
|nearest_unigene=Hs.516316 | |nearest_unigene=Hs.516316 | ||
| Line 28: | Line 33: | ||
|tss_id=hg_5204.1 | |tss_id=hg_5204.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 03:39, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 151124466 |
|---|---|
| End of the center position in the TSS region: | 151124467 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF143872 |
|---|---|
| Distance: | 153 |
| Num_trans: | 1 |
| All_trans: | AF143872:153 |
TATA-Box annotation
| Distance to TSS: | 22164 |
|---|---|
| Nearest PromoterID: | NM_030913 |
| Entrez ID: | 10500 |
| Nearest Unigene: | Hs.516316 |
| Nearest Refseq: | NM_030913 |
| Nearest Ensembl: | ENSG00000143434 |
| Gene Name: | GA binding protein transcription factor subunit beta 2 |
| Gene Alias: | SEMAY|m-SemaY|m-SemaY2 |
| Gene Description: | semaphorin 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
