Difference between revisions of "TSS:Hg 52043.1"
From referenceTSS
| Line 4: | Line 4: | ||
|PEE5= | |PEE5= | ||
|TMPRSS10= | |TMPRSS10= | ||
| − | |all_trans=ENST00000610355.4:0 ENST00000504584.1:0 ENST00000502726.5 | + | |all_trans=ENST00000610355.4:0 ENST00000504584.1:0 ENST00000502726.5:0 NM_001278585:0 LP896327:0 AK304466:0 BX648285:0 ENST00000502252.5:24 AK304038:24 ENST00000273857.9:29 ENST00000503821.5:29 NM_006587:29 NM_001278586:29 AK297675:29 AF133845:54 BC110451:54 ENST00000505909.5:147 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 13: | Line 13: | ||
|entrez_id=10699 | |entrez_id=10699 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=ATC2 | + | |gene_alias=ATC2{{!}}CRN{{!}}Lrp4{{!}}PEE5{{!}}TMPRSS10 |
| − | |gene_description= | + | |gene_description=corin, serine peptidase |
|gene_id=10699 | |gene_id=10699 | ||
| − | |gene_name= | + | |gene_name=corin, serine peptidase |
|gene_source=HGNC:19012 | |gene_source=HGNC:19012 | ||
|gene_symbol=CORIN | |gene_symbol=CORIN | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_006587 | |nearest_refseq=NM_006587 | ||
|nearest_unigene=Hs.518618 | |nearest_unigene=Hs.518618 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=47838095 | |start=47838095 | ||
|start_of_center_position=47838103 | |start_of_center_position=47838103 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000610355.4 ENST00000504584.1 ENST00000502726.5 | + | |transcript_name=ENST00000610355.4 ENST00000504584.1 ENST00000502726.5 NM_001278585 LP896327 AK304466 BX648285 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_52043.1 | |tss_id=hg_52043.1 | ||
Revision as of 03:39, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47838103 |
|---|---|
| End of the center position in the TSS region: | 47838104 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000610355.4 ENST00000504584.1 ENST00000502726.5 NM_001278585 LP896327 AK304466 BX648285 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000610355.4:0 ENST00000504584.1:0 ENST00000502726.5:0 NM_001278585:0 LP896327:0 AK304466:0 BX648285:0 ENST00000502252.5:24 AK304038:24 ENST00000273857.9:29 ENST00000503821.5:29 NM_006587:29 NM_001278586:29 AK297675:29 AF133845:54 BC110451:54 ENST00000505909.5:147 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_001278585 |
| Entrez ID: | 10699 |
| Nearest Unigene: | Hs.518618 |
| Nearest Refseq: | NM_006587 |
| Nearest Ensembl: | ENSG00000145244 |
| Gene Name: | corin, serine peptidase |
| Gene Alias: | ATC2|CRN|Lrp4|PEE5|TMPRSS10 |
| Gene Description: | corin, serine peptidase |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
