Difference between revisions of "TSS:Hg 54122.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000608178.5:0 NR_033939:0 | + | |all_trans=ENST00000512692.7:0 ENST00000658255.1:0 ENST00000608178.5:0 NR_033939:0 LP896339:0 ENST00000664103.1:17 AK095554:17 ENST00000609616.1:23 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=140373393 | |start_of_center_position=140373393 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000608178.5 NR_033939 | + | |transcript_name=ENST00000512692.7 ENST00000658255.1 ENST00000608178.5 NR_033939 LP896339 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_54122.1 | |tss_id=hg_54122.1 | ||
Revision as of 04:28, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 140373393 |
|---|---|
| End of the center position in the TSS region: | 140373394 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000512692.7 ENST00000658255.1 ENST00000608178.5 NR_033939 LP896339 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000512692.7:0 ENST00000658255.1:0 ENST00000608178.5:0 NR_033939:0 LP896339:0 ENST00000664103.1:17 AK095554:17 ENST00000609616.1:23 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_033939 |
| Entrez ID: | 100129858 |
| Nearest Unigene: | Hs.660477 |
| Nearest Refseq: | NR_033939 |
| Nearest Ensembl: | ENSG00000196951 |
| Gene Name: | SCOC antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | SCOC antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
