Difference between revisions of "TSS:Hg 57643.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK290034:-89 AB020685:-114 BC041337:-123 BC013169:-140 ENST00000512878 | + | |all_trans=AK290034:-89 AB020685:-114 BC041337:-123 ENST00000379982.8:-126 NM_014899:-126 BC013169:-140 ENST00000512878.1:261 BC020231:-285 ENST00000506817.1:-316 BC047884:-316 CU691986:390 KJ898412:390 AB385392:395 ENST00000510623.1:492 |
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=-89 | |distance=-89 | ||
| − | |distance_to_tss= | + | |distance_to_tss=127 |
|end=95731464 | |end=95731464 | ||
|end_of_center_position=95731463 | |end_of_center_position=95731463 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_014899 | |nearest_refseq=NM_014899 | ||
|nearest_unigene=Hs.445030 | |nearest_unigene=Hs.445030 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=95731461 | |start=95731461 | ||
Revision as of 05:50, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 95731462 |
|---|---|
| End of the center position in the TSS region: | 95731463 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK290034 |
|---|---|
| Distance: | -89 |
| Num_trans: | 14 |
| All_trans: | AK290034:-89 AB020685:-114 BC041337:-123 ENST00000379982.8:-126 NM_014899:-126 BC013169:-140 ENST00000512878.1:261 BC020231:-285 ENST00000506817.1:-316 BC047884:-316 CU691986:390 KJ898412:390 AB385392:395 ENST00000510623.1:492 |
TATA-Box annotation
| Distance to TSS: | 127 |
|---|---|
| Nearest PromoterID: | NM_014899 |
| Entrez ID: | 22836 |
| Nearest Unigene: | Hs.445030 |
| Nearest Refseq: | NM_014899 |
| Nearest Ensembl: | ENSG00000164292 |
| Gene Name: | Rho related BTB domain containing 3 |
| Gene Alias: | - |
| Gene Description: | Rho related BTB domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
