Difference between revisions of "TSS:Hg 5783.1"
From referenceTSS
| Line 4: | Line 4: | ||
|TRKA= | |TRKA= | ||
|Trk-A= | |Trk-A= | ||
| − | |all_trans=ENST00000489021.6 | + | |all_trans=ENST00000489021.6:0 ENST00000392302.7:12 ENST00000674537.1:27 ENST00000497019.7:35 AK126428:35 NM_001007792:106 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 13: | Line 13: | ||
|entrez_id=4914 | |entrez_id=4914 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=MTC | + | |gene_alias=MTC{{!}}TRK{{!}}TRK1{{!}}TRKA{{!}}Trk-A{{!}}p140-TrkA |
|gene_description=neurotrophic receptor tyrosine kinase 1 | |gene_description=neurotrophic receptor tyrosine kinase 1 | ||
|gene_id=4914 | |gene_id=4914 | ||
| − | |gene_name= | + | |gene_name=neurotrophic receptor tyrosine kinase 1 |
|gene_source=HGNC:8031 | |gene_source=HGNC:8031 | ||
|gene_symbol=NTRK1 | |gene_symbol=NTRK1 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_002529 | |nearest_refseq=NM_002529 | ||
|nearest_unigene=Hs.406293 | |nearest_unigene=Hs.406293 | ||
| − | |num_trans= | + | |num_trans=6 |
|p140-TrkA= | |p140-TrkA= | ||
|species=human | |species=human | ||
| Line 32: | Line 32: | ||
|start_of_center_position=156815638 | |start_of_center_position=156815638 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000489021.6 | + | |transcript_name=ENST00000489021.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_5783.1 | |tss_id=hg_5783.1 | ||
Revision as of 05:55, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 156815638 |
|---|---|
| End of the center position in the TSS region: | 156815639 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000489021.6 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000489021.6:0 ENST00000392302.7:12 ENST00000674537.1:27 ENST00000497019.7:35 AK126428:35 NM_001007792:106 |
TATA-Box annotation
| Distance to TSS: | -111 |
|---|---|
| Nearest PromoterID: | NM_001007792 |
| Entrez ID: | 4914 |
| Nearest Unigene: | Hs.406293 |
| Nearest Refseq: | NM_002529 |
| Nearest Ensembl: | ENSG00000198400 |
| Gene Name: | neurotrophic receptor tyrosine kinase 1 |
| Gene Alias: | MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA |
| Gene Description: | neurotrophic receptor tyrosine kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
