Difference between revisions of "TSS:Hg 65811.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000379426.2:29 NM_001100829:29 LF209763:260 MA445340:260 | ||
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| − | |distance= | + | |distance=29 |
| − | |distance_to_tss=- | + | |distance_to_tss=-50 |
|end=11537720 | |end=11537720 | ||
|end_of_center_position=11537699 | |end_of_center_position=11537699 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=transmembrane protein 170B | |gene_description=transmembrane protein 170B | ||
| − | |gene_name=TMEM170B | + | |gene_id=100113407 |
| + | |gene_name=transmembrane protein 170B | ||
| + | |gene_source=HGNC:34244 | ||
| + | |gene_symbol=TMEM170B | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:34244 | ||
|nearest_ensembl=ENSG00000205269 | |nearest_ensembl=ENSG00000205269 | ||
|nearest_promoter_id=NM_001100829 | |nearest_promoter_id=NM_001100829 | ||
|nearest_refseq=NM_001100829 | |nearest_refseq=NM_001100829 | ||
|nearest_unigene=Hs.146317 | |nearest_unigene=Hs.146317 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=11537677 | |start=11537677 | ||
|start_of_center_position=11537698 | |start_of_center_position=11537698 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000379426.2 NM_001100829 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_65811.1 | |tss_id=hg_65811.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q5T4T1 | ||
}} | }} | ||
Revision as of 09:00, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11537698 |
|---|---|
| End of the center position in the TSS region: | 11537699 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000379426.2 NM_001100829 |
|---|---|
| Distance: | 29 |
| Num_trans: | 4 |
| All_trans: | ENST00000379426.2:29 NM_001100829:29 LF209763:260 MA445340:260 |
TATA-Box annotation
| Distance to TSS: | -50 |
|---|---|
| Nearest PromoterID: | NM_001100829 |
| Entrez ID: | 100113407 |
| Nearest Unigene: | Hs.146317 |
| Nearest Refseq: | NM_001100829 |
| Nearest Ensembl: | ENSG00000205269 |
| Gene Name: | transmembrane protein 170B |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 170B |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
