Difference between revisions of "TSS:Hg 69756.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AB067500:186 ENST00000296978.4:469 NM_001258277:469 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=186 | |distance=186 | ||
| − | |distance_to_tss= | + | |distance_to_tss=334 |
|end=130365548 | |end=130365548 | ||
|end_of_center_position=130365534 | |end_of_center_position=130365534 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=130365533 | |start_of_center_position=130365533 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AB067500 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_69756.1 | |tss_id=hg_69756.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 10:32, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 130365533 |
|---|---|
| End of the center position in the TSS region: | 130365534 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB067500 |
|---|---|
| Distance: | 186 |
| Num_trans: | 3 |
| All_trans: | AB067500:186 ENST00000296978.4:469 NM_001258277:469 |
TATA-Box annotation
| Distance to TSS: | 334 |
|---|---|
| Nearest PromoterID: | NM_001258275 |
| Entrez ID: | 154075 |
| Nearest Unigene: | Hs.440508 |
| Nearest Refseq: | NM_152552 |
| Nearest Ensembl: | ENSG00000164483 |
| Gene Name: | transmembrane protein 200A |
| Gene Alias: | - |
| Gene Description: | sterile alpha motif domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
