Difference between revisions of "TSS:Hg 69763.1"
From referenceTSS
| Line 2: | Line 2: | ||
|TTMA= | |TTMA= | ||
|TTMC= | |TTMC= | ||
| − | |all_trans=ENST00000617887.4:-24 NM_001258276 | + | |all_trans=ENST00000617887.4:-24 NM_001258276:-24 AK315824:56 BC044246:133 ENST00000296978.4:-288 NM_001258277:-288 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 11: | Line 11: | ||
|entrez_id=114801 | |entrez_id=114801 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=KIAA1913 | + | |gene_alias=KIAA1913{{!}}TTMA{{!}}TTMC |
|gene_description=transmembrane protein 200A | |gene_description=transmembrane protein 200A | ||
|gene_id=114801 | |gene_id=114801 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=130366316 | |start_of_center_position=130366316 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000617887.4 NM_001258276 | + | |transcript_name=ENST00000617887.4 NM_001258276 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_69763.1 | |tss_id=hg_69763.1 | ||
Revision as of 10:32, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 130366316 |
|---|---|
| End of the center position in the TSS region: | 130366317 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000617887.4 NM_001258276 |
|---|---|
| Distance: | -24 |
| Num_trans: | 6 |
| All_trans: | ENST00000617887.4:-24 NM_001258276:-24 AK315824:56 BC044246:133 ENST00000296978.4:-288 NM_001258277:-288 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_001258276 |
| Entrez ID: | 114801 |
| Nearest Unigene: | Hs.591341 |
| Nearest Refseq: | NM_052913 |
| Nearest Ensembl: | ENSG00000164484 |
| Gene Name: | transmembrane protein 200A |
| Gene Alias: | KIAA1913|TTMA|TTMC |
| Gene Description: | transmembrane protein 200A |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
