Difference between revisions of "TSS:Hg 7247.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HsSwt1= | |HsSwt1= | ||
| − | |all_trans=ENST00000367500. | + | |all_trans=ENST00000367500.9:0 NM_017673:0 BC030781:-3 AK315802:18 AK127980:-40 ENST00000367501.7:-82 NM_001105518:-102 AK291443:118 ENST00000450350.1:307 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=185157175 | |end=185157175 | ||
|end_of_center_position=185157169 | |end_of_center_position=185157169 | ||
|entrez_id=54823 | |entrez_id=54823 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=C1orf26 | + | |gene_alias=C1orf26{{!}}HsSwt1 |
| − | |gene_description= | + | |gene_description=SWT1 RNA endoribonuclease homolog |
|gene_id=54823 | |gene_id=54823 | ||
| − | |gene_name= | + | |gene_name=SWT1 RNA endoribonuclease homolog |
|gene_source=HGNC:16785 | |gene_source=HGNC:16785 | ||
|gene_symbol=SWT1 | |gene_symbol=SWT1 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_017673 | |nearest_refseq=NM_017673 | ||
|nearest_unigene=Hs.134183 | |nearest_unigene=Hs.134183 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=185157161 | |start=185157161 | ||
|start_of_center_position=185157168 | |start_of_center_position=185157168 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000367500. | + | |transcript_name=ENST00000367500.9 NM_017673 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_7247.1 | |tss_id=hg_7247.1 | ||
Revision as of 11:35, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185157168 |
|---|---|
| End of the center position in the TSS region: | 185157169 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000367500.9 NM_017673 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000367500.9:0 NM_017673:0 BC030781:-3 AK315802:18 AK127980:-40 ENST00000367501.7:-82 NM_001105518:-102 AK291443:118 ENST00000450350.1:307 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_017673 |
| Entrez ID: | 54823 |
| Nearest Unigene: | Hs.134183 |
| Nearest Refseq: | NM_017673 |
| Nearest Ensembl: | ENSG00000116668 |
| Gene Name: | SWT1 RNA endoribonuclease homolog |
| Gene Alias: | C1orf26|HsSwt1 |
| Gene Description: | SWT1 RNA endoribonuclease homolog |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
