Difference between revisions of "TSS:Hg 73297.1"
From referenceTSS
| Line 2: | Line 2: | ||
|RP14= | |RP14= | ||
|TUBL1= | |TUBL1= | ||
| − | |all_trans=AL122066:61 | + | |all_trans=AL122066:61 LP883688:92 LX145720:92 LX245277:92 MP262593:92 MB471180:92 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=61 | |distance=61 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-62883 |
|end=35575783 | |end=35575783 | ||
|end_of_center_position=35575780 | |end_of_center_position=35575780 | ||
|entrez_id=7287 | |entrez_id=7287 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=LCA15 | + | |gene_alias=LCA15{{!}}RP14{{!}}TUBL1 |
| − | |gene_description= | + | |gene_description=TUB like protein 1 |
|gene_id=2289 | |gene_id=2289 | ||
| − | |gene_name= | + | |gene_name=FKBP prolyl isomerase 5 |
|gene_source=HGNC:3721 | |gene_source=HGNC:3721 | ||
|gene_symbol=FKBP5 | |gene_symbol=FKBP5 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:3721 | |hgnc_mgi_id=HGNC:3721 | ||
|nearest_ensembl=ENSG00000112041 | |nearest_ensembl=ENSG00000112041 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001289395 |
|nearest_refseq=NM_003322 | |nearest_refseq=NM_003322 | ||
|nearest_unigene=Hs.485208 | |nearest_unigene=Hs.485208 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=35575775 | |start=35575775 | ||
Revision as of 11:55, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35575779 |
|---|---|
| End of the center position in the TSS region: | 35575780 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AL122066 |
|---|---|
| Distance: | 61 |
| Num_trans: | 6 |
| All_trans: | AL122066:61 LP883688:92 LX145720:92 LX245277:92 MP262593:92 MB471180:92 |
TATA-Box annotation
| Distance to TSS: | -62883 |
|---|---|
| Nearest PromoterID: | NM_001289395 |
| Entrez ID: | 7287 |
| Nearest Unigene: | Hs.485208 |
| Nearest Refseq: | NM_003322 |
| Nearest Ensembl: | ENSG00000112041 |
| Gene Name: | FKBP prolyl isomerase 5 |
| Gene Alias: | LCA15|RP14|TUBL1 |
| Gene Description: | TUB like protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
