Difference between revisions of "TSS:Hg 73311.1"
From referenceTSS
| Line 5: | Line 5: | ||
|PPIase= | |PPIase= | ||
|Ptg-10= | |Ptg-10= | ||
| − | |all_trans=ENST00000536438.5:-231 NM_001145775:-231 | + | |all_trans=ENST00000536438.5:-231 NM_001145775:-231 LP895559:-231 BC042605:-231 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 14: | Line 14: | ||
|entrez_id=2289 | |entrez_id=2289 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=AIG6 | + | |gene_alias=AIG6{{!}}FKBP51{{!}}FKBP54{{!}}P54{{!}}PPIase{{!}}Ptg-10 |
| − | |gene_description= | + | |gene_description=FKBP prolyl isomerase 5 |
|gene_id=2289 | |gene_id=2289 | ||
| − | |gene_name= | + | |gene_name=FKBP prolyl isomerase 5 |
|gene_source=HGNC:3721 | |gene_source=HGNC:3721 | ||
|gene_symbol=FKBP5 | |gene_symbol=FKBP5 | ||
| Line 32: | Line 32: | ||
|start_of_center_position=35728345 | |start_of_center_position=35728345 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-33(GCTTTAATAGAG,+,0.00) |
| − | |transcript_name=ENST00000536438.5 NM_001145775 | + | |transcript_name=ENST00000536438.5 NM_001145775 LP895559 BC042605 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_73311.1 | |tss_id=hg_73311.1 | ||
Revision as of 11:55, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35728345 |
|---|---|
| End of the center position in the TSS region: | 35728346 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000536438.5 NM_001145775 LP895559 BC042605 |
|---|---|
| Distance: | -231 |
| Num_trans: | 4 |
| All_trans: | ENST00000536438.5:-231 NM_001145775:-231 LP895559:-231 BC042605:-231 |
TATA-Box annotation
| Distance to TSS: | 238 |
|---|---|
| Nearest PromoterID: | NM_001145775 |
| Entrez ID: | 2289 |
| Nearest Unigene: | Hs.407190 |
| Nearest Refseq: | NM_004117 |
| Nearest Ensembl: | ENSG00000096060 |
| Gene Name: | FKBP prolyl isomerase 5 |
| Gene Alias: | AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 |
| Gene Description: | FKBP prolyl isomerase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GCTTTAATAGAG,+,0.00) |
