Difference between revisions of "TSS:Hg 80992.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000609480.4:0 NM_001195150:0 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=128866335 | |end=128866335 | ||
|end_of_center_position=128866330 | |end_of_center_position=128866330 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=ATP6V1F neighbor |
|gene_id=100130705 | |gene_id=100130705 | ||
| − | |gene_name= | + | |gene_name=ATP6V1F neighbor |
| − | |gene_source= | + | |gene_source=HGNC:52392 |
| − | |gene_symbol= | + | |gene_symbol=ATP6V1FNB |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:52392 |
|nearest_ensembl=ENSG00000272899 | |nearest_ensembl=ENSG00000272899 | ||
|nearest_promoter_id=NM_001195150 | |nearest_promoter_id=NM_001195150 | ||
|nearest_refseq=NM_001195150 | |nearest_refseq=NM_001195150 | ||
|nearest_unigene=Hs.641532 | |nearest_unigene=Hs.641532 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=128866324 | |start=128866324 | ||
|start_of_center_position=128866329 | |start_of_center_position=128866329 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001195150 | + | |transcript_name=ENST00000609480.4 NM_001195150 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_80992.1 | |tss_id=hg_80992.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A1B0GUX0 |
}} | }} | ||
Revision as of 14:55, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128866329 |
|---|---|
| End of the center position in the TSS region: | 128866330 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000609480.4 NM_001195150 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000609480.4:0 NM_001195150:0 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001195150 |
| Entrez ID: | 100130705 |
| Nearest Unigene: | Hs.641532 |
| Nearest Refseq: | NM_001195150 |
| Nearest Ensembl: | ENSG00000272899 |
| Gene Name: | ATP6V1F neighbor |
| Gene Alias: | - |
| Gene Description: | ATP6V1F neighbor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
