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Difference between revisions of "TSS:Hg 82139.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=NR_027387:-31 BC036622:51 ENST00000564834.1:-369 uc011kvo.4:-369
+
|all_trans=NR_027387:-31 BC036622:51 ENST00000564834.1:-369
 
|chr=chr7
 
|chr=chr7
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 22: Line 22:
 
|nearest_refseq=NR_027387
 
|nearest_refseq=NR_027387
 
|nearest_unigene=Hs.647112
 
|nearest_unigene=Hs.647112
|num_trans=4
+
|num_trans=3
 
|species=human
 
|species=human
 
|start=152464154
 
|start=152464154

Revision as of 15:21, 18 June 2021

Basic information about the TSS


TSS ID:hg_82139.1
Species:human
Chr:chr7
TSS Classification:yes
Start:152464154
End:152464171
Strand:+
TSS Score:1
Start of the center position in the TSS region:152464162
End of the center position in the TSS region:152464163



Gene and protein annotation


Transcript_name:NR_027387
Distance:-31
GeneID:100128822
HGNC/MGI_ID:HGNC:48957
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 1003
Gene_symbol:LINC01003
Gene_synonyms:
Gene_source:HGNC:48957



Transcript annotation


Transcript_name:NR_027387
Distance:-31
Num_trans:3
All_trans:NR_027387:-31 BC036622:51 ENST00000564834.1:-369



TATA-Box annotation


Distance to TSS:39
Nearest PromoterID:NR_027387
Entrez ID:100128822
Nearest Unigene:Hs.647112
Nearest Refseq:NR_027387
Nearest Ensembl:ENSG00000261455
Gene Name:long intergenic non-protein coding RNA 1003
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 1003
Gene Type:ncRNA
CpG%:0.13
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):