Difference between revisions of "TSS:Hg 87528.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ZNF372= | |ZNF372= | ||
| − | |all_trans= | + | |all_trans=AB023584:133 BC050272:-155 ENST00000262096.13:288 NM_016353:288 BC039253:328 HM005679:328 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=133 | |distance=133 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-293 |
|end=17156194 | |end=17156194 | ||
|end_of_center_position=17156189 | |end_of_center_position=17156189 | ||
|entrez_id=51201 | |entrez_id=51201 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=DHHC2 | + | |gene_alias=DHHC2{{!}}ZNF372 |
|gene_description=zinc finger DHHC-type containing 2 | |gene_description=zinc finger DHHC-type containing 2 | ||
|gene_id=51201 | |gene_id=51201 | ||
| − | |gene_name=zinc finger DHHC-type | + | |gene_name=zinc finger DHHC-type palmitoyltransferase 2 |
|gene_source=HGNC:18469 | |gene_source=HGNC:18469 | ||
|gene_symbol=ZDHHC2 | |gene_symbol=ZDHHC2 | ||
| − | |gene_synonyms=ZNF372 | + | |gene_synonyms=DHHC2 ZNF372 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:18469 | |hgnc_mgi_id=HGNC:18469 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=17156188 | |start_of_center_position=17156188 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AB023584 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_87528.1 | |tss_id=hg_87528.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:26, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17156188 |
|---|---|
| End of the center position in the TSS region: | 17156189 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB023584 |
|---|---|
| Distance: | 133 |
| Num_trans: | 6 |
| All_trans: | AB023584:133 BC050272:-155 ENST00000262096.13:288 NM_016353:288 BC039253:328 HM005679:328 |
TATA-Box annotation
| Distance to TSS: | -293 |
|---|---|
| Nearest PromoterID: | NM_016353 |
| Entrez ID: | 51201 |
| Nearest Unigene: | Hs.728241 |
| Nearest Refseq: | NM_016353 |
| Nearest Ensembl: | ENSG00000104219 |
| Gene Name: | zinc finger DHHC-type palmitoyltransferase 2 |
| Gene Alias: | DHHC2|ZNF372 |
| Gene Description: | zinc finger DHHC-type containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
