Difference between revisions of "TSS:Hg 9111.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|CEMCOX4= | |CEMCOX4= | ||
| − | |all_trans=ENST00000366615. | + | |all_trans=ENST00000366615.10:0 ENST00000619305.1:0 NM_001206641:0 BC052810:59 BC035925:64 ENST00000366613.1:213 NM_001012985:213 BC116455:213 ENST00000366612.1:231 NM_001301733:231 BC064905:231 BC025793:317 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=234373470 | |end=234373470 | ||
|end_of_center_position=234373456 | |end_of_center_position=234373456 | ||
|entrez_id=388753 | |entrez_id=388753 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=C1orf31 | + | |gene_alias=C1orf31{{!}}CEMCOX4 |
|gene_description=cytochrome c oxidase assembly factor 6 | |gene_description=cytochrome c oxidase assembly factor 6 | ||
|gene_id=388753 | |gene_id=388753 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001012985 | |nearest_refseq=NM_001012985 | ||
|nearest_unigene=Hs.23198 | |nearest_unigene=Hs.23198 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=234373440 | |start=234373440 | ||
|start_of_center_position=234373455 | |start_of_center_position=234373455 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000366615. | + | |transcript_name=ENST00000366615.10 ENST00000619305.1 NM_001206641 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_9111.1 | |tss_id=hg_9111.1 | ||
Revision as of 18:49, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 234373455 |
|---|---|
| End of the center position in the TSS region: | 234373456 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000366615.10 ENST00000619305.1 NM_001206641 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000366615.10:0 ENST00000619305.1:0 NM_001206641:0 BC052810:59 BC035925:64 ENST00000366613.1:213 NM_001012985:213 BC116455:213 ENST00000366612.1:231 NM_001301733:231 BC064905:231 BC025793:317 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001206641 |
| Entrez ID: | 388753 |
| Nearest Unigene: | Hs.23198 |
| Nearest Refseq: | NM_001012985 |
| Nearest Ensembl: | ENSG00000168275 |
| Gene Name: | cytochrome c oxidase assembly factor 6 |
| Gene Alias: | C1orf31|CEMCOX4 |
| Gene Description: | cytochrome c oxidase assembly factor 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
