Difference between revisions of "TSS:Hg 92028.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MP44= | |MP44= | ||
|MTSG1= | |MTSG1= | ||
| − | |all_trans=ENST00000520196.5:-299 | + | |all_trans=LF372117:201 MA607694:201 ENST00000520196.5:-299 AL096842:-299 LF372116:416 MA607693:416 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=201 |
|distance_to_tss=-32131 | |distance_to_tss=-32131 | ||
|end=17754712 | |end=17754712 | ||
| Line 13: | Line 13: | ||
|entrez_id=57509 | |entrez_id=57509 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=ATBP | + | |gene_alias=ATBP{{!}}ATIP{{!}}ATIP3{{!}}ICIS{{!}}MP44{{!}}MTSG1 |
| − | |gene_description=microtubule associated | + | |gene_description=microtubule associated scaffold protein 1 |
|gene_id=57509 | |gene_id=57509 | ||
| − | |gene_name= | + | |gene_name=MTUS1 |
|gene_source=HGNC:29789 | |gene_source=HGNC:29789 | ||
|gene_symbol=MTUS1 | |gene_symbol=MTUS1 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_020749 | |nearest_refseq=NM_020749 | ||
|nearest_unigene=Hs.7946 | |nearest_unigene=Hs.7946 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=17754699 | |start=17754699 | ||
|start_of_center_position=17754705 | |start_of_center_position=17754705 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-53(GCCCTTTAATGG,-,0.00),-51(CCTTTAATGGTG,+,0.00) |
| − | |transcript_name= | + | |transcript_name=LF372117 MA607694 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_92028.1 | |tss_id=hg_92028.1 | ||
Latest revision as of 19:11, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17754705 |
|---|---|
| End of the center position in the TSS region: | 17754706 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF372117 MA607694 |
|---|---|
| Distance: | 201 |
| Num_trans: | 6 |
| All_trans: | LF372117:201 MA607694:201 ENST00000520196.5:-299 AL096842:-299 LF372116:416 MA607693:416 |
TATA-Box annotation
| Distance to TSS: | -32131 |
|---|---|
| Nearest PromoterID: | NM_001166393 |
| Entrez ID: | 57509 |
| Nearest Unigene: | Hs.7946 |
| Nearest Refseq: | NM_020749 |
| Nearest Ensembl: | ENSG00000129422 |
| Gene Name: | MTUS1 |
| Gene Alias: | ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 |
| Gene Description: | microtubule associated scaffold protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -53(GCCCTTTAATGG,-,0.00),-51(CCTTTAATGGTG,+,0.00) |
