Difference between revisions of "TSS:Hg 92038.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MP44= | |MP44= | ||
|MTSG1= | |MTSG1= | ||
| − | |all_trans=FJ458440:56 FJ458439:-256 FJ458441:278 ENST00000381869.5:368 ENST00000523718.5:368 NM_001001925:368 NM_001001924 | + | |all_trans=LF208094:46 MA443671:46 LF213941:47 MA449518:47 FJ458440:56 NM_001363059:61 NM_001363058:61 NM_001363062:61 NR_156437:61 NM_001363057:191 NM_001363060:191 FJ458439:-256 FJ458441:278 NM_001363061:-284 ENST00000381869.5:368 ENST00000523718.5:368 NM_001001925:368 NM_001001924:368 AK310871:368 AY363099:408 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=46 |
| − | |distance_to_tss=- | + | |distance_to_tss=-66 |
|end=17801295 | |end=17801295 | ||
|end_of_center_position=17801290 | |end_of_center_position=17801290 | ||
|entrez_id=57509 | |entrez_id=57509 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=ATBP | + | |gene_alias=ATBP{{!}}ATIP{{!}}ATIP3{{!}}ICIS{{!}}MP44{{!}}MTSG1 |
| − | |gene_description=microtubule associated | + | |gene_description=microtubule associated scaffold protein 1 |
|gene_id=57509 | |gene_id=57509 | ||
| − | |gene_name= | + | |gene_name=MTUS1 |
|gene_source=HGNC:29789 | |gene_source=HGNC:29789 | ||
|gene_symbol=MTUS1 | |gene_symbol=MTUS1 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:29789 | |hgnc_mgi_id=HGNC:29789 | ||
|nearest_ensembl=ENSG00000129422 | |nearest_ensembl=ENSG00000129422 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_156437 |
|nearest_refseq=NM_020749 | |nearest_refseq=NM_020749 | ||
|nearest_unigene=Hs.7946 | |nearest_unigene=Hs.7946 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=17801284 | |start=17801284 | ||
|start_of_center_position=17801289 | |start_of_center_position=17801289 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF208094 MA443671 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92038.1 | |tss_id=hg_92038.1 | ||
Latest revision as of 19:11, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17801289 |
|---|---|
| End of the center position in the TSS region: | 17801290 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF208094 MA443671 |
|---|---|
| Distance: | 46 |
| Num_trans: | 20 |
| All_trans: | LF208094:46 MA443671:46 LF213941:47 MA449518:47 FJ458440:56 NM_001363059:61 NM_001363058:61 NM_001363062:61 NR_156437:61 NM_001363057:191 NM_001363060:191 FJ458439:-256 FJ458441:278 NM_001363061:-284 ENST00000381869.5:368 ENST00000523718.5:368 NM_001001925:368 NM_001001924:368 AK310871:368 AY363099:408 |
TATA-Box annotation
| Distance to TSS: | -66 |
|---|---|
| Nearest PromoterID: | NR_156437 |
| Entrez ID: | 57509 |
| Nearest Unigene: | Hs.7946 |
| Nearest Refseq: | NM_020749 |
| Nearest Ensembl: | ENSG00000129422 |
| Gene Name: | MTUS1 |
| Gene Alias: | ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 |
| Gene Description: | microtubule associated scaffold protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
