Difference between revisions of "TSS:Hg 94813.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000651667.1:-163 ENST00000517869.2:-163 ENST00000522865.5:-163 ENST00000661778.1:-178 ENST00000662179.1:-178 ENST00000500989.2:-202 BX648371:-202 NR_038447:-210 NR_038446:-210 ENST00000518964.5:-262 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:45133 | |hgnc_mgi_id=HGNC:45133 | ||
|nearest_ensembl=ENSG00000245164 | |nearest_ensembl=ENSG00000245164 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_038446 |
|nearest_refseq=NR_038446 | |nearest_refseq=NR_038446 | ||
|nearest_unigene=Hs.729642 | |nearest_unigene=Hs.729642 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=125950973 | |start=125950973 | ||
|start_of_center_position=125950980 | |start_of_center_position=125950980 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000651667.1 ENST00000517869.2 ENST00000522865.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_94813.1 | |tss_id=hg_94813.1 | ||
Revision as of 20:16, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125950980 |
|---|---|
| End of the center position in the TSS region: | 125950981 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000651667.1 ENST00000517869.2 ENST00000522865.5 |
|---|---|
| Distance: | -163 |
| Num_trans: | 10 |
| All_trans: | ENST00000651667.1:-163 ENST00000517869.2:-163 ENST00000522865.5:-163 ENST00000661778.1:-178 ENST00000662179.1:-178 ENST00000500989.2:-202 BX648371:-202 NR_038447:-210 NR_038446:-210 ENST00000518964.5:-262 |
TATA-Box annotation
| Distance to TSS: | 217 |
|---|---|
| Nearest PromoterID: | NR_038446 |
| Entrez ID: | 100130231 |
| Nearest Unigene: | Hs.729642 |
| Nearest Refseq: | NR_038446 |
| Nearest Ensembl: | ENSG00000245164 |
| Gene Name: | long intergenic non-protein coding RNA 861 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 861 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
