Difference between revisions of "TSS:Mm 100055.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000100235.8:0 ENSMUST00000061450.6:0 ENSMUST00000135536.7:0 ENSMUST00000156230.1:0 NM_001033393 | + | |all_trans=ENSMUST00000100235.8:0 ENSMUST00000061450.6:0 ENSMUST00000135536.7:0 ENSMUST00000156230.1:0 NM_001033393:0 AK131112:0 AK171314:0 AK155041:0 AK040894:0 AK171457:0 AK167098:0 AK049868:0 BC140976:5 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 9: | Line 9: | ||
|entrez_id=320534 | |entrez_id=320534 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=C630005D06Rik | + | |gene_alias=C630005D06Rik{{!}}mFLJ00021 |
|gene_description=transmembrane protein 104 | |gene_description=transmembrane protein 104 | ||
|gene_id=320534 | |gene_id=320534 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001033393 | |nearest_refseq=NM_001033393 | ||
|nearest_unigene=Mm.260587 | |nearest_unigene=Mm.260587 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=mouse | |species=mouse | ||
|start=115187481 | |start=115187481 | ||
|start_of_center_position=115187521 | |start_of_center_position=115187521 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000100235.8 ENSMUST00000061450.6 ENSMUST00000135536.7 ENSMUST00000156230.1 NM_001033393 | + | |transcript_name=ENSMUST00000100235.8 ENSMUST00000061450.6 ENSMUST00000135536.7 ENSMUST00000156230.1 NM_001033393 AK131112 AK171314 AK155041 AK040894 AK171457 AK167098 AK049868 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100055.1 | |tss_id=mm_100055.1 | ||
Revision as of 16:08, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115187521 |
|---|---|
| End of the center position in the TSS region: | 115187522 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000100235.8 ENSMUST00000061450.6 ENSMUST00000135536.7 ENSMUST00000156230.1 NM_001033393 AK131112 AK171314 AK155041 AK040894 AK171457 AK167098 AK049868 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000100235.8:0 ENSMUST00000061450.6:0 ENSMUST00000135536.7:0 ENSMUST00000156230.1:0 NM_001033393:0 AK131112:0 AK171314:0 AK155041:0 AK040894:0 AK171457:0 AK167098:0 AK049868:0 BC140976:5 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_001033393 |
| Entrez ID: | 320534 |
| Nearest Unigene: | Mm.260587 |
| Nearest Refseq: | NM_001033393 |
| Nearest Ensembl: | ENSMUSG00000045980 |
| Gene Name: | transmembrane protein 104 |
| Gene Alias: | C630005D06Rik|mFLJ00021 |
| Gene Description: | transmembrane protein 104 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
