Difference between revisions of "TSS:Mm 100065.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Gm21= | |Gm21= | ||
| − | |all_trans=ENSMUST00000053288.5:0 NM_001080929 | + | |all_trans=ENSMUST00000053288.5:0 NM_001080929:0 BC144823:113 BC150668:113 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 10: | Line 10: | ||
|entrez_id=237988 | |entrez_id=237988 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=D030068L24Rik | + | |gene_alias=D030068L24Rik{{!}}Gm21 |
|gene_description=cerebellar degeneration-related protein 2-like | |gene_description=cerebellar degeneration-related protein 2-like | ||
|gene_id=237988 | |gene_id=237988 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001080929 | |nearest_refseq=NM_001080929 | ||
|nearest_unigene=Mm.102872 | |nearest_unigene=Mm.102872 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=115381906 | |start=115381906 | ||
|start_of_center_position=115381919 | |start_of_center_position=115381919 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000053288.5 NM_001080929 | + | |transcript_name=ENSMUST00000053288.5 NM_001080929 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100065.1 | |tss_id=mm_100065.1 | ||
Revision as of 16:08, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115381919 |
|---|---|
| End of the center position in the TSS region: | 115381920 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000053288.5 NM_001080929 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000053288.5:0 NM_001080929:0 BC144823:113 BC150668:113 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001080929 |
| Entrez ID: | 237988 |
| Nearest Unigene: | Mm.102872 |
| Nearest Refseq: | NM_001080929 |
| Nearest Ensembl: | ENSMUSG00000050910 |
| Gene Name: | cerebellar degeneration-related protein 2-like |
| Gene Alias: | D030068L24Rik|Gm21 |
| Gene Description: | cerebellar degeneration-related protein 2-like |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
