Difference between revisions of "TSS:Mm 100093.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AB341708:-6 ENSMUST00000058109.8:-51 | + | |all_trans=AB341708:-6 ENSMUST00000058109.8:-51 LF198983:-52 MA434560:-52 NM_025305:146 AK131937:146 AK012225:157 BC049636:157 AK162024:179 AK009251:193 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 9: | Line 9: | ||
|entrez_id=260302 | |entrez_id=260302 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=C230037M19Rik | + | |gene_alias=C230037M19Rik{{!}}mKIAA0154 |
| − | |gene_description= | + | |gene_description=golgi associated, gamma adaptin ear containing, ARF binding protein 3 |
|gene_name=Gga3 | |gene_name=Gga3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 18: | Line 18: | ||
|nearest_refseq=NM_173048 | |nearest_refseq=NM_173048 | ||
|nearest_unigene=Mm.119479 | |nearest_unigene=Mm.119479 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=115603975 | |start=115603975 | ||
Latest revision as of 16:08, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115603984 |
|---|---|
| End of the center position in the TSS region: | 115603985 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB341708 |
|---|---|
| Distance: | -6 |
| Num_trans: | 10 |
| All_trans: | AB341708:-6 ENSMUST00000058109.8:-51 LF198983:-52 MA434560:-52 NM_025305:146 AK131937:146 AK012225:157 BC049636:157 AK162024:179 AK009251:193 |
TATA-Box annotation
| Distance to TSS: | -69 |
|---|---|
| Nearest PromoterID: | NM_173048 |
| Entrez ID: | 260302 |
| Nearest Unigene: | Mm.119479 |
| Nearest Refseq: | NM_173048 |
| Nearest Ensembl: | ENSMUSG00000020740 |
| Gene Name: | Gga3 |
| Gene Alias: | C230037M19Rik|mKIAA0154 |
| Gene Description: | golgi associated, gamma adaptin ear containing, ARF binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
