Difference between revisions of "TSS:Mm 100268.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000132261.1:59 | + | |all_trans=NR_167777:0 NR_167776:0 NR_167773:0 NR_167775:0 ENSMUST00000132261.1:59 NR_167774:-347 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=39167 | |distance_to_tss=39167 | ||
|end=117523544 | |end=117523544 | ||
| Line 9: | Line 9: | ||
|entrez_id=432615 | |entrez_id=432615 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 11733 | |gene_description=predicted gene 11733 | ||
| − | |gene_id= | + | |gene_id=102638005 |
|gene_name=predicted gene 11734 | |gene_name=predicted gene 11734 | ||
|gene_source=MGI:3652086 | |gene_source=MGI:3652086 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_130966 | |nearest_refseq=NR_130966 | ||
|nearest_unigene=Mm.126359 | |nearest_unigene=Mm.126359 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=117523526 | |start=117523526 | ||
|start_of_center_position=117523535 | |start_of_center_position=117523535 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NR_167777 NR_167776 NR_167773 NR_167775 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100268.1 | |tss_id=mm_100268.1 | ||
Revision as of 16:13, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117523535 |
|---|---|
| End of the center position in the TSS region: | 117523536 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_167777 NR_167776 NR_167773 NR_167775 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | NR_167777:0 NR_167776:0 NR_167773:0 NR_167775:0 ENSMUST00000132261.1:59 NR_167774:-347 |
TATA-Box annotation
| Distance to TSS: | 39167 |
|---|---|
| Nearest PromoterID: | NR_130966 |
| Entrez ID: | 432615 |
| Nearest Unigene: | Mm.126359 |
| Nearest Refseq: | NR_130966 |
| Nearest Ensembl: | ENSMUSG00000069588 |
| Gene Name: | predicted gene 11734 |
| Gene Alias: | - |
| Gene Description: | predicted gene 11733 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
