Difference between revisions of "TSS:Mm 100365.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|MOD2= | |MOD2= | ||
| − | |all_trans=AK157869:0 | + | |all_trans=AK157869:0 BC035199:-4 Y13274:8 NM_007623:-12 ENSMUST00000026662.7:-71 X62537:-71 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 10: | Line 10: | ||
|entrez_id=12416 | |entrez_id=12416 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=M33 | + | |gene_alias=M33{{!}}MOD2{{!}}pc |
|gene_description=chromobox 2 | |gene_description=chromobox 2 | ||
|gene_id=12416 | |gene_id=12416 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_007623 | |nearest_refseq=NM_007623 | ||
|nearest_unigene=Mm.14547 | |nearest_unigene=Mm.14547 | ||
| − | |num_trans= | + | |num_trans=6 |
|pc= | |pc= | ||
|species=mouse | |species=mouse | ||
Revision as of 16:15, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119023068 |
|---|---|
| End of the center position in the TSS region: | 119023069 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK157869 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | AK157869:0 BC035199:-4 Y13274:8 NM_007623:-12 ENSMUST00000026662.7:-71 X62537:-71 |
TATA-Box annotation
| Distance to TSS: | 47 |
|---|---|
| Nearest PromoterID: | NM_007623 |
| Entrez ID: | 12416 |
| Nearest Unigene: | Mm.14547 |
| Nearest Refseq: | NM_007623 |
| Nearest Ensembl: | ENSMUSG00000025577 |
| Gene Name: | chromobox 2 |
| Gene Alias: | M33|MOD2|pc |
| Gene Description: | chromobox 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
