Difference between revisions of "TSS:Mm 100539.1"
From referenceTSS
| Line 6: | Line 6: | ||
|RCC17= | |RCC17= | ||
|TUG= | |TUG= | ||
| − | |all_trans=ENSMUST00000169964.1:0 NM_026877:0 | + | |all_trans=ENSMUST00000169964.1:0 NM_026877:0 NM_001363055:0 ENSMUST00000026135.14:14 ENSMUST00000171700.1:48 AK162722:48 BC022115:60 BC019177:63 BC031153:63 ENSMUST00000106158.8:78 AY349133:78 ENSMUST00000168097.7:85 ENSMUST00000103016.7:86 ENSMUST00000168714.8:105 ENSMUST00000143844.8:120 AK088197:145 NM_001363056:377 ENSMUST00000135346.7:381 ENSMUST00000127269.7:396 ENSMUST00000131727.8:396 ENSMUST00000149389.7:414 ENSMUST00000153346.7:426 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 15: | Line 15: | ||
|entrez_id=68938 | |entrez_id=68938 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=1190006K01Rik | + | |gene_alias=1190006K01Rik{{!}}ASPC{{!}}ASPCR1{{!}}ASPL{{!}}ASPS{{!}}RCC17{{!}}TUG |
| − | |gene_description= | + | |gene_description=alveolar soft part sarcoma chromosome region, candidate 1 (human) |
|gene_id=68938 | |gene_id=68938 | ||
| − | |gene_name= | + | |gene_name=alveolar soft part sarcoma chromosome region, candidate 1 (human) |
|gene_source=MGI:1916188 | |gene_source=MGI:1916188 | ||
|gene_symbol=Aspscr1 | |gene_symbol=Aspscr1 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_026877 | |nearest_refseq=NM_026877 | ||
|nearest_unigene=Mm.294020 | |nearest_unigene=Mm.294020 | ||
| − | |num_trans= | + | |num_trans=22 |
|species=mouse | |species=mouse | ||
|start=120672967 | |start=120672967 | ||
|start_of_center_position=120672972 | |start_of_center_position=120672972 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000169964.1 NM_026877 | + | |transcript_name=ENSMUST00000169964.1 NM_026877 NM_001363055 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100539.1 | |tss_id=mm_100539.1 | ||
Revision as of 16:19, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120672972 |
|---|---|
| End of the center position in the TSS region: | 120672973 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000169964.1 NM_026877 NM_001363055 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENSMUST00000169964.1:0 NM_026877:0 NM_001363055:0 ENSMUST00000026135.14:14 ENSMUST00000171700.1:48 AK162722:48 BC022115:60 BC019177:63 BC031153:63 ENSMUST00000106158.8:78 AY349133:78 ENSMUST00000168097.7:85 ENSMUST00000103016.7:86 ENSMUST00000168714.8:105 ENSMUST00000143844.8:120 AK088197:145 NM_001363056:377 ENSMUST00000135346.7:381 ENSMUST00000127269.7:396 ENSMUST00000131727.8:396 ENSMUST00000149389.7:414 ENSMUST00000153346.7:426 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_026877 |
| Entrez ID: | 68938 |
| Nearest Unigene: | Mm.294020 |
| Nearest Refseq: | NM_026877 |
| Nearest Ensembl: | ENSMUSG00000025142 |
| Gene Name: | alveolar soft part sarcoma chromosome region, candidate 1 (human) |
| Gene Alias: | 1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG |
| Gene Description: | alveolar soft part sarcoma chromosome region, candidate 1 (human) |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
