Difference between revisions of "TSS:Mm 100683.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=2169 | |distance_to_tss=2169 | ||
|end=3502667 | |end=3502667 | ||
| Line 10: | Line 10: | ||
|entrez_id=170835 | |entrez_id=170835 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=Pib5pa | + | |gene_alias=Pib5pa{{!}}Pipp |
|gene_description=inositol polyphosphate 5-phosphatase J | |gene_description=inositol polyphosphate 5-phosphatase J | ||
|gene_id=170835 | |gene_id=170835 | ||
| − | |gene_name= | + | |gene_name=Inpp5j |
|gene_source=MGI:2158663 | |gene_source=MGI:2158663 | ||
|gene_symbol=Inpp5j | |gene_symbol=Inpp5j | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_172439 | |nearest_refseq=NM_172439 | ||
|nearest_unigene=Mm.24313 | |nearest_unigene=Mm.24313 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=mouse | |species=mouse | ||
|start=3502636 | |start=3502636 | ||
|start_of_center_position=3502651 | |start_of_center_position=3502651 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100683.1 | |tss_id=mm_100683.1 | ||
Latest revision as of 16:22, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3502651 |
|---|---|
| End of the center position in the TSS region: | 3502652 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | uc029rkf.1:-132 |
TATA-Box annotation
| Distance to TSS: | 2169 |
|---|---|
| Nearest PromoterID: | NM_172439 |
| Entrez ID: | 170835 |
| Nearest Unigene: | Mm.24313 |
| Nearest Refseq: | NM_172439 |
| Nearest Ensembl: | ENSMUSG00000034570 |
| Gene Name: | Inpp5j |
| Gene Alias: | Pib5pa|Pipp |
| Gene Description: | inositol polyphosphate 5-phosphatase J |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
