Difference between revisions of "TSS:Mm 100948.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=829 | |distance_to_tss=829 | ||
|end=6561023 | |end=6561023 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=6561011 | |start_of_center_position=6561011 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-81(CCCTCTAAAAAA,-,0.00),7(GCTTAAAGAGCA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:29, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6561011 |
|---|---|
| End of the center position in the TSS region: | 6561012 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 829 |
|---|---|
| Nearest PromoterID: | NM_001190344 |
| Entrez ID: | 216527 |
| Nearest Unigene: | Mm.221271 |
| Nearest Refseq: | NM_146014 |
| Nearest Ensembl: | ENSMUSG00000000378 |
| Gene Name: | Ccm2 |
| Gene Alias: | BC029157 |
| Gene Description: | cerebral cavernous malformation 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -81(CCCTCTAAAAAA,-,0.00),7(GCTTAAAGAGCA,+,0.00) |
