Difference between revisions of "TSS:Mm 101.1"
From referenceTSS
| Line 3: | Line 3: | ||
|D1Ertd701e= | |D1Ertd701e= | ||
|Rrr= | |Rrr= | ||
| − | |all_trans=ENSMUST00000072079.8:0 NM_021511 | + | |all_trans=ENSMUST00000072079.8:0 NM_021511:0 AK142041:0 BC003481:0 AB041589:0 AK122207:0 BC055925:0 AK017683:0 AK010178:0 AK019913:0 AK019257:3 AK181278:32 AK186193:32 LF203458:43 MA439035:43 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 12: | Line 12: | ||
|entrez_id=59014 | |entrez_id=59014 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=5730466A07Rik | + | |gene_alias=5730466A07Rik{{!}}AA415037{{!}}D1Ertd701e{{!}}Rrr |
|gene_description=ribosome biogenesis regulator 1 | |gene_description=ribosome biogenesis regulator 1 | ||
|gene_id=59014 | |gene_id=59014 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_021511 | |nearest_refseq=NM_021511 | ||
|nearest_unigene=Mm.29061 | |nearest_unigene=Mm.29061 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=9545397 | |start=9545397 | ||
|start_of_center_position=9545438 | |start_of_center_position=9545438 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000072079.8 NM_021511 | + | |transcript_name=ENSMUST00000072079.8 NM_021511 AK142041 BC003481 AB041589 AK122207 BC055925 AK017683 AK010178 AK019913 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101.1 | |tss_id=mm_101.1 | ||
Revision as of 16:30, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 9545438 |
|---|---|
| End of the center position in the TSS region: | 9545439 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000072079.8 NM_021511 AK142041 BC003481 AB041589 AK122207 BC055925 AK017683 AK010178 AK019913 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000072079.8:0 NM_021511:0 AK142041:0 BC003481:0 AB041589:0 AK122207:0 BC055925:0 AK017683:0 AK010178:0 AK019913:0 AK019257:3 AK181278:32 AK186193:32 LF203458:43 MA439035:43 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_021511 |
| Entrez ID: | 59014 |
| Nearest Unigene: | Mm.29061 |
| Nearest Refseq: | NM_021511 |
| Nearest Ensembl: | ENSMUSG00000061024 |
| Gene Name: | ribosome biogenesis regulator 1 |
| Gene Alias: | 5730466A07Rik|AA415037|D1Ertd701e|Rrr |
| Gene Description: | ribosome biogenesis regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
