Difference between revisions of "TSS:Mm 101323.1"
From referenceTSS
| Line 9: | Line 9: | ||
|BGnT2= | |BGnT2= | ||
|Beta3gnt= | |Beta3gnt= | ||
| − | |all_trans=AK163599:0 ENSMUST00000055549.3:-32 NM_001169114 | + | |all_trans=AK163599:0 ENSMUST00000055549.3:-32 NM_001169114:97 BC009075:97 ENSMUST00000062844.10:332 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 18: | Line 18: | ||
|entrez_id=53625 | |entrez_id=53625 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=AA408337 | + | |gene_alias=AA408337{{!}}AA409404{{!}}AW260308{{!}}B3Galt6{{!}}B3gnt1{{!}}BGnT-1{{!}}BGnT-2{{!}}BGnT1{{!}}BGnT2{{!}}Beta3gnt |
| − | |gene_description= | + | |gene_description=UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 |
|gene_name=B3gnt2 | |gene_name=B3gnt2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_016888 | |nearest_refseq=NM_016888 | ||
|nearest_unigene=Mm.395495 | |nearest_unigene=Mm.395495 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=22860432 | |start=22860432 | ||
Latest revision as of 16:37, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 22860444 |
|---|---|
| End of the center position in the TSS region: | 22860445 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK163599 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | AK163599:0 ENSMUST00000055549.3:-32 NM_001169114:97 BC009075:97 ENSMUST00000062844.10:332 |
TATA-Box annotation
| Distance to TSS: | -108 |
|---|---|
| Nearest PromoterID: | NM_001169114 |
| Entrez ID: | 53625 |
| Nearest Unigene: | Mm.395495 |
| Nearest Refseq: | NM_016888 |
| Nearest Ensembl: | ENSMUSG00000051650 |
| Gene Name: | B3gnt2 |
| Gene Alias: | AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt |
| Gene Description: | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
