Difference between revisions of "TSS:Mm 101378.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK172490:207 ENSMUST00000102864.4 | + | |all_trans=AK172490:207 ENSMUST00000102864.4:230 X15842:230 X60271:230 NM_009044:231 BC139770:288 BC139447:290 BC139448:290 AK031627:433 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=207 | |distance=207 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-236 |
|end=23771210 | |end=23771210 | ||
|end_of_center_position=23771205 | |end_of_center_position=23771205 | ||
| Line 17: | Line 17: | ||
|nearest_refseq=NM_009044 | |nearest_refseq=NM_009044 | ||
|nearest_unigene=Mm.4869 | |nearest_unigene=Mm.4869 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=23771199 | |start=23771199 | ||
Latest revision as of 16:39, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 23771204 |
|---|---|
| End of the center position in the TSS region: | 23771205 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK172490 |
|---|---|
| Distance: | 207 |
| Num_trans: | 9 |
| All_trans: | AK172490:207 ENSMUST00000102864.4:230 X15842:230 X60271:230 NM_009044:231 BC139770:288 BC139447:290 BC139448:290 AK031627:433 |
TATA-Box annotation
| Distance to TSS: | -236 |
|---|---|
| Nearest PromoterID: | NM_009044 |
| Entrez ID: | 19696 |
| Nearest Unigene: | Mm.4869 |
| Nearest Refseq: | NM_009044 |
| Nearest Ensembl: | ENSMUSG00000020275 |
| Gene Name: | Rel |
| Gene Alias: | c-Rel |
| Gene Description: | reticuloendotheliosis oncogene |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
