Difference between revisions of "TSS:Mm 101379.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK172490:238 ENSMUST00000102864.4 | + | |all_trans=AK172490:238 ENSMUST00000102864.4:261 X15842:261 X60271:261 NM_009044:262 BC139770:319 BC139447:321 BC139448:321 AK031627:464 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=238 | |distance=238 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-278 |
|end=23771264 | |end=23771264 | ||
|end_of_center_position=23771248 | |end_of_center_position=23771248 | ||
| Line 17: | Line 17: | ||
|nearest_refseq=NM_009044 | |nearest_refseq=NM_009044 | ||
|nearest_unigene=Mm.4869 | |nearest_unigene=Mm.4869 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=23771230 | |start=23771230 | ||
Latest revision as of 16:39, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 23771247 |
|---|---|
| End of the center position in the TSS region: | 23771248 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK172490 |
|---|---|
| Distance: | 238 |
| Num_trans: | 9 |
| All_trans: | AK172490:238 ENSMUST00000102864.4:261 X15842:261 X60271:261 NM_009044:262 BC139770:319 BC139447:321 BC139448:321 AK031627:464 |
TATA-Box annotation
| Distance to TSS: | -278 |
|---|---|
| Nearest PromoterID: | NM_009044 |
| Entrez ID: | 19696 |
| Nearest Unigene: | Mm.4869 |
| Nearest Refseq: | NM_009044 |
| Nearest Ensembl: | ENSMUSG00000020275 |
| Gene Name: | Rel |
| Gene Alias: | c-Rel |
| Gene Description: | reticuloendotheliosis oncogene |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
